RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 ATG14Q6ZNE5 492 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 SPACA3Q8IXA5 215 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 MRPL41Q8IXM3 137 aaKnown RBP5.57□□□□□ -1.52
CASC4-210ENST00000559550 RIN3Q8TB24 985 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 XAGE3Q8WTP9 111 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 TMEM87BQ96K49 555 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 NT5C1AQ9BXI3 368 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 FOXQ1Q9C009 403 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 KCNK12Q9HB15 430 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 PRDM10Q9NQV6 1147 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 REV1Q9UBZ9 1251 aa5.57□□□□□ -1.52
CASC4-210ENST00000559550 ROBO2Q9HCK4 1378 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 PITPNM2Q9BZ72 1349 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 UPK3BL1B0FP48 263 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 UPK3BL2E5RIL1 263 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 EOMESO95936 686 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 CST3P01034 146 aaPredicted RBP5.56□□□□□ -1.52
CASC4-210ENST00000559550 PDE4BQ07343 736 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 IKZF1Q13422 519 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 CWF19L2Q2TBE0 894 aaKnown RBP5.56□□□□□ -1.52
CASC4-210ENST00000559550 TMEM67Q5HYA8 995 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 TMEM201Q5SNT2 666 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 MCATQ8IVS2 390 aaKnown RBP5.56□□□□□ -1.52
CASC4-210ENST00000559550 DIRC2Q96SL1 478 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 NSUN3Q9H649 340 aaKnown RBP5.56□□□□□ -1.52
CASC4-210ENST00000559550 ADAM30Q9UKF2 790 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 PCDHB14Q9Y5E9 798 aa5.56□□□□□ -1.52
CASC4-210ENST00000559550 A0A0G2JLL6 359 aaPredicted RBP5.55□□□□□ -1.52
CASC4-210ENST00000559550 FOXD2O60548 495 aaPredicted RBP5.55□□□□□ -1.52
CASC4-210ENST00000559550 TMEM253P0C7T8 217 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 GLDCP23378 1020 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 CLCQ05315 142 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 NKPD1Q17RQ9 610 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 DIEXFQ68CQ4 756 aaKnown RBP5.55□□□□□ -1.52
CASC4-210ENST00000559550 SLC6A19Q695T7 634 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 CIAPIN1Q6FI81 312 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 DBX2Q6ZNG2 339 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 ARHGAP27Q6ZUM4 889 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 SLITRK4Q8IW52 837 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 ZNF654Q8IZM8 581 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 MIPEPQ99797 713 aa5.55□□□□□ -1.52
CASC4-210ENST00000559550 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.55□□□□□ -1.52
CASC4-210ENST00000559550 CHURC1-FNTBB4DL54 471 aa5.54□□□□□ -1.52
CASC4-210ENST00000559550 TCF3P15923 654 aa5.54□□□□□ -1.52
CASC4-210ENST00000559550 PAK2Q13177 524 aa5.54□□□□□ -1.52
CASC4-210ENST00000559550 LETMD1Q6P1Q0 360 aa5.54□□□□□ -1.52
CASC4-210ENST00000559550 FAM13CQ8NE31 585 aa5.54□□□□□ -1.52
CASC4-210ENST00000559550 NKD1Q969G9 470 aa5.54□□□□□ -1.52
CASC4-210ENST00000559550 ACBD3Q9H3P7 528 aa5.54□□□□□ -1.52
CASC4-210ENST00000559550 PARD6AQ9NPB6 346 aa5.54□□□□□ -1.52
CASC4-210ENST00000559550 KLHL3Q9UH77 587 aa5.54□□□□□ -1.52
CASC4-210ENST00000559550 SMG5Q9UPR3 1016 aaKnown RBP5.54□□□□□ -1.52
CASC4-210ENST00000559550 ETV2O00321 342 aaPredicted RBP5.53□□□□□ -1.52
CASC4-210ENST00000559550 ATE1O95260 518 aa5.53□□□□□ -1.52
CASC4-210ENST00000559550 MCM4P33991 863 aa5.53□□□□□ -1.52
CASC4-210ENST00000559550 TNNI2P48788 182 aa5.53□□□□□ -1.52
CASC4-210ENST00000559550 GK5Q6ZS86 529 aa5.53□□□□□ -1.52
CASC4-210ENST00000559550 MFSD2AQ8NA29 543 aa5.53□□□□□ -1.52
CASC4-210ENST00000559550 ANTXR1Q9H6X2 564 aa5.53□□□□□ -1.52
CASC4-210ENST00000559550 EHMT1Q9H9B1 1298 aa5.53□□□□□ -1.52
CASC4-210ENST00000559550 IGSF5Q9NSI5 407 aa5.53□□□□□ -1.52
CASC4-210ENST00000559550 E9PSI1 815 aa5.52□□□□□ -1.53
CASC4-210ENST00000559550 IGF2BP3O00425 579 aaKnown RBP eCLIP5.52□□□□□ -1.53
CASC4-210ENST00000559550 GDNFP39905 211 aa5.52□□□□□ -1.53
CASC4-210ENST00000559550 LINC00310P59036 64 aa5.52□□□□□ -1.53
CASC4-210ENST00000559550 CDH24Q86UP0 819 aa5.52□□□□□ -1.53
CASC4-210ENST00000559550 GGNQ86UU5 652 aa5.52□□□□□ -1.53
CASC4-210ENST00000559550 SLFN12Q8IYM2 578 aa5.52□□□□□ -1.53
CASC4-210ENST00000559550 REXO1Q8N1G1 1221 aaKnown RBP5.52□□□□□ -1.53
CASC4-210ENST00000559550 DNAJB8Q8NHS0 232 aa5.52□□□□□ -1.53
CASC4-210ENST00000559550 PPP1R13LQ8WUF5 828 aa5.52□□□□□ -1.53
CASC4-210ENST00000559550 TGIF2Q9GZN2 237 aa5.52□□□□□ -1.53
CASC4-210ENST00000559550 TCAF2A6NFQ2 919 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 SLC22A31A6NKX4 558 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 PRR33A8MZF0 331 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 NUAK1O60285 661 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 ERCC5P28715 1186 aaPredicted RBP5.51□□□□□ -1.53
CASC4-210ENST00000559550 ZNF165P49910 485 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 NFKB2Q00653 900 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 OVOS1Q6IE37 1185 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 CYB5D2Q8WUJ1 264 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 GPRASP2Q96D09 838 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 PRDM5Q9NQX1 630 aaPredicted RBP5.51□□□□□ -1.53
CASC4-210ENST00000559550 GINM1Q9NU53 330 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 TPX2Q9ULW0 747 aaKnown RBP5.51□□□□□ -1.53
CASC4-210ENST00000559550 PPT2Q9UMR5 302 aa5.51□□□□□ -1.53
CASC4-210ENST00000559550 POLR2BP30876 1174 aaKnown RBP5.5□□□□□ -1.53
CASC4-210ENST00000559550 GJA8P48165 433 aa5.5□□□□□ -1.53
CASC4-210ENST00000559550 YARSP54577 528 aaKnown RBP5.5□□□□□ -1.53
CASC4-210ENST00000559550 ARSHQ5FYA8 562 aa5.5□□□□□ -1.53
CASC4-210ENST00000559550 BAHD1Q8TBE0 780 aaPredicted RBP5.5□□□□□ -1.53
CASC4-210ENST00000559550 EPB41L4BQ9H329 900 aa5.5□□□□□ -1.53
CASC4-210ENST00000559550 CCSER2Q9H7U1 834 aa5.5□□□□□ -1.53
CASC4-210ENST00000559550 CARS2Q9HA77 564 aaKnown RBP5.5□□□□□ -1.53
CASC4-210ENST00000559550 GMIPQ9P107 970 aa5.5□□□□□ -1.53
CASC4-210ENST00000559550 GTF2IRD1Q9UHL9 959 aa5.5□□□□□ -1.53
CASC4-210ENST00000559550 MAPK8IP1Q9UQF2 711 aa5.5□□□□□ -1.53
CASC4-210ENST00000559550 EFR3BQ9Y2G0 817 aa5.5□□□□□ -1.53
CASC4-210ENST00000559550 RASGRP4Q8TDF6 673 aa5.49□□□□□ -1.53
CASC4-210ENST00000559550 ATG4CQ96DT6 458 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms