RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 LDHCP07864 332 aa12.66□□□□□ -0.38
SPG11-217ENST00000559511 PRR29P0C7W0 189 aa12.66□□□□□ -0.38
SPG11-217ENST00000559511 ATP1A3P13637 1013 aa12.66□□□□□ -0.38
SPG11-217ENST00000559511 VEGFAP15692 232 aaPredicted RBP12.66□□□□□ -0.38
SPG11-217ENST00000559511 TFAP4Q01664 338 aa12.66□□□□□ -0.38
SPG11-217ENST00000559511 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
SPG11-217ENST00000559511 RTFDC1Q9BY42 306 aaPredicted RBP12.66□□□□□ -0.38
SPG11-217ENST00000559511 SERTAD1Q9UHV2 236 aa12.66□□□□□ -0.38
SPG11-217ENST00000559511 ROBO3Q96MS0 1386 aa12.66□□□□□ -0.38
SPG11-217ENST00000559511 ADAMTS3O15072 1205 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 PDE6BP35913 854 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 CCZ1BP86790 482 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 CCZ1P86791 482 aaPredicted RBP12.65□□□□□ -0.38
SPG11-217ENST00000559511 POSTNQ15063 836 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 GRAMD1CQ8IYS0 662 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 PDILTQ8N807 584 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 TGFBRAP1Q8WUH2 860 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 ADAMTSL1Q8N6G6 1762 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 MYH8P13535 1937 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 DYNC1I1O14576 645 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 ACTN4O43707 911 aaKnown RBP12.65□□□□□ -0.38
SPG11-217ENST00000559511 BAG3O95817 575 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 SCG2P13521 617 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 TPM4P67936 248 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 MFSD14BQ5SR56 506 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 POTEAQ6S8J7 498 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 OSBPL5Q9H0X9 879 aaPredicted RBP12.65□□□□□ -0.38
SPG11-217ENST00000559511 MAN1B1Q9UKM7 699 aa12.65□□□□□ -0.38
SPG11-217ENST00000559511 MORC2Q9Y6X9 1032 aaPredicted RBP12.65□□□□□ -0.38
SPG11-217ENST00000559511 FAM205AQ6ZU69 1335 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 A0A087X0B3 334 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 RIMBP2O15034 1052 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 NEMFO60524 1076 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 SKILP12757 684 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 ALDH1B1P30837 517 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 PLCD1P51178 756 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 FANCCQ00597 558 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 MYL5Q02045 173 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 PFKFB3Q16875 520 aaPredicted RBP12.64□□□□□ -0.39
SPG11-217ENST00000559511 NT5DC1Q5TFE4 455 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 EPSTI1Q96J88 318 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 C16orf45Q96MC5 204 aaPredicted RBP12.64□□□□□ -0.39
SPG11-217ENST00000559511 KAT14Q9H8E8 782 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 BRMS1Q9HCU9 246 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
SPG11-217ENST00000559511 USP17L3A6NCW0 530 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 USP17L4A6NCW7 530 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 SARSP49591 514 aaKnown RBP12.64□□□□□ -0.39
SPG11-217ENST00000559511 RBM10P98175 930 aaKnown RBP12.64□□□□□ -0.39
SPG11-217ENST00000559511 ZNF174Q15697 407 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 USP17L1Q7RTZ2 530 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 TMC6Q7Z403 805 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 MAPKAPK5Q8IW41 473 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 STAG2Q8N3U4 1231 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 PNMA1Q8ND90 353 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 TBC1D22AQ8WUA7 517 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 MASTLQ96GX5 879 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
SPG11-217ENST00000559511 IMPACTQ9P2X3 320 aa12.64□□□□□ -0.39
SPG11-217ENST00000559511 SAP30BPQ9UHR5 308 aaKnown RBP12.64□□□□□ -0.39
SPG11-217ENST00000559511 HOOK1Q9UJC3 728 aaKnown RBP12.64□□□□□ -0.39
SPG11-217ENST00000559511 GPR75-ASB3A0A0A6YYF3 556 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 USP27XA6NNY8 438 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 KIF5BP33176 963 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 BTDP43251 543 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 TTC38Q5R3I4 469 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 DGKHQ86XP1 1220 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 DPF2Q92785 391 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 COA1Q9GZY4 146 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 MKNK2Q9HBH9 465 aa12.63□□□□□ -0.39
SPG11-217ENST00000559511 GTF2F1P35269 517 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPG11-217ENST00000559511 GSDMDP57764 484 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 NLRP5P59047 1200 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 GTF2IP78347 998 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 EZH2Q15910 746 aaKnown RBP12.62□□□□□ -0.39
SPG11-217ENST00000559511 ARMCX5Q6P1M9 558 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 PIK3AP1Q6ZUJ8 805 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
SPG11-217ENST00000559511 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
SPG11-217ENST00000559511 FANCLQ9NW38 375 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 SCN9AQ15858 1988 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 GAKO14976 1311 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 TSPY3P0CV98 308 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 TSPY8P0CW00 308 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 RASA1P20936 1047 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 PTGDRQ13258 359 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 MORC3Q14149 939 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 GRM4Q14833 912 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 SLC35G1Q2M3R5 365 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 DPP8Q6V1X1 898 aaPredicted RBP12.62□□□□□ -0.39
SPG11-217ENST00000559511 AMOTL1Q8IY63 956 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 TSC1Q92574 1164 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
SPG11-217ENST00000559511 SMARCE1Q969G3 411 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 FERMT2Q96AC1 680 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 DHX58Q96C10 678 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
SPG11-217ENST00000559511 ZC3H12CQ9C0D7 883 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms