RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 IQCA1Q86XH1 822 aa18.84■□□□□ 0.61
SPG11-215ENST00000559193 GPR161Q8N6U8 529 aaKnown RBP18.84■□□□□ 0.61
SPG11-215ENST00000559193 BRMS1Q9HCU9 246 aa18.84■□□□□ 0.61
SPG11-215ENST00000559193 GNL3LQ9NVN8 582 aaKnown RBP18.84■□□□□ 0.61
SPG11-215ENST00000559193 A0A0G2JS52 829 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 A0A0U1RQJ8 604 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 SEMA3EO15041 775 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 MFAP3LO75121 409 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 DDAH1O94760 285 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 CTR9Q6PD62 1173 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 PPFIBP1Q86W92 1011 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 CCDC12Q8WUD4 166 aaPredicted RBP18.83■□□□□ 0.6
SPG11-215ENST00000559193 ATRIPQ8WXE1 791 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 STAMQ92783 540 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 SCN7AQ01118 1682 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 CALM1P0DP23 149 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 CALM2P0DP24 149 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 CALM3P0DP25 149 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 PTGDRQ13258 359 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 E2F4Q16254 413 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 CPLX3Q8WVH0 158 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 NAA15Q9BXJ9 866 aaKnown RBP18.83■□□□□ 0.6
SPG11-215ENST00000559193 CTNND2Q9UQB3 1225 aa18.83■□□□□ 0.6
SPG11-215ENST00000559193 LOC102724428A0A0B4J2F2 783 aa18.82■□□□□ 0.6
SPG11-215ENST00000559193 SIK1P57059 783 aa18.82■□□□□ 0.6
SPG11-215ENST00000559193 CC2D1AQ6P1N0 951 aaPredicted RBP18.82■□□□□ 0.6
SPG11-215ENST00000559193 CTAGE1Q96RT6 745 aa18.82■□□□□ 0.6
SPG11-215ENST00000559193 LZTFL1Q9NQ48 299 aa18.82■□□□□ 0.6
SPG11-215ENST00000559193 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.82■□□□□ 0.6
SPG11-215ENST00000559193 MYH14Q7Z406 1995 aaKnown RBP18.82■□□□□ 0.6
SPG11-215ENST00000559193 SRBD1Q8N5C6 995 aaKnown RBP18.82■□□□□ 0.6
SPG11-215ENST00000559193 COL16A1Q07092 1604 aaPredicted RBP18.82■□□□□ 0.6
SPG11-215ENST00000559193 SASH3O75995 380 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 TBC1D8O95759 1140 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 GYPCP04921 128 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 FAM193AP78312 1265 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 UBE4AQ14139 1066 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 ANKRD18AQ8IVF6 992 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 ACSBG1Q96GR2 724 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 BLZF1Q9H2G9 400 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 USP17L12C9JPN9 530 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 USP17L21D6R901 530 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 NMT2O60551 498 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 COBLO75128 1261 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 PCP11498 1178 aaKnown RBP18.81■□□□□ 0.6
SPG11-215ENST00000559193 CASP14P31944 242 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 RABGGTAQ92696 567 aa18.81■□□□□ 0.6
SPG11-215ENST00000559193 ADAMTS3O15072 1205 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 ATP8B1O43520 1251 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 FXR1P51114 621 aaKnown RBP eCLIP18.8■□□□□ 0.6
SPG11-215ENST00000559193 PDXDC2PQ6P474 469 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 GOLGA1Q92805 767 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 MTRQ99707 1265 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 ITIH6Q6UXX5 1313 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 FECHP22830 423 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 IL17AQ16552 155 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 FILIP1LQ4L180 1135 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 RASGRP2Q7LDG7 609 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 CREBRFQ8IUR6 639 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 FAM84BQ96KN1 310 aaPredicted RBP18.8■□□□□ 0.6
SPG11-215ENST00000559193 PARD6BQ9BYG5 372 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 UBXN6Q9BZV1 441 aa18.8■□□□□ 0.6
SPG11-215ENST00000559193 CCT6AP40227 531 aaKnown RBP18.79■□□□□ 0.6
SPG11-215ENST00000559193 KRT31Q15323 416 aa18.79■□□□□ 0.6
SPG11-215ENST00000559193 ERFEQ4G0M1 354 aa18.79■□□□□ 0.6
SPG11-215ENST00000559193 PIK3AP1Q6ZUJ8 805 aa18.79■□□□□ 0.6
SPG11-215ENST00000559193 VEGFAP15692 232 aaPredicted RBP18.79■□□□□ 0.6
SPG11-215ENST00000559193 CAVIN4Q5BKX8 364 aa18.79■□□□□ 0.6
SPG11-215ENST00000559193 CNGA4Q8IV77 575 aa18.79■□□□□ 0.6
SPG11-215ENST00000559193 IQUBQ8NA54 791 aa18.79■□□□□ 0.6
SPG11-215ENST00000559193 CTCFLQ8NI51 663 aaPredicted RBP18.79■□□□□ 0.6
SPG11-215ENST00000559193 BSDC1Q9NW68 430 aaPredicted RBP18.79■□□□□ 0.6
SPG11-215ENST00000559193 LIMA1Q9UHB6 759 aaKnown RBP18.79■□□□□ 0.6
SPG11-215ENST00000559193 TAF1P21675 1872 aa18.78■□□□□ 0.6
SPG11-215ENST00000559193 ORC4O43929 436 aa18.78■□□□□ 0.6
SPG11-215ENST00000559193 SCG2P13521 617 aa18.78■□□□□ 0.6
SPG11-215ENST00000559193 MINPP1Q9UNW1 487 aa18.78■□□□□ 0.6
SPG11-215ENST00000559193 FAM47AQ5JRC9 791 aa18.78■□□□□ 0.6
SPG11-215ENST00000559193 RRAGBQ5VZM2 374 aa18.78■□□□□ 0.6
SPG11-215ENST00000559193 NSUN4Q96CB9 384 aaKnown RBP18.78■□□□□ 0.6
SPG11-215ENST00000559193 CCDC51Q96ER9 411 aa18.78■□□□□ 0.6
SPG11-215ENST00000559193 GTPBP6O43824 516 aaPredicted RBP18.77■□□□□ 0.6
SPG11-215ENST00000559193 KIF5CO60282 957 aa18.77■□□□□ 0.6
SPG11-215ENST00000559193 MCM7P33993 719 aa18.77■□□□□ 0.6
SPG11-215ENST00000559193 TRAPPC10P48553 1259 aa18.77■□□□□ 0.6
SPG11-215ENST00000559193 NLRP5P59047 1200 aa18.77■□□□□ 0.6
SPG11-215ENST00000559193 SF3B3Q15393 1217 aaKnown RBP18.77■□□□□ 0.6
SPG11-215ENST00000559193 RWDD2AQ9UIY3 292 aa18.77■□□□□ 0.6
SPG11-215ENST00000559193 KLRK1P26718 216 aa18.77■□□□□ 0.59
SPG11-215ENST00000559193 TXLNAP40222 546 aa18.77■□□□□ 0.59
SPG11-215ENST00000559193 PFKFB3Q16875 520 aaPredicted RBP18.77■□□□□ 0.59
SPG11-215ENST00000559193 DCP1AQ9NPI6 582 aaPredicted RBP18.77■□□□□ 0.59
SPG11-215ENST00000559193 CYP2D6P10635 497 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 CYP2C19P33261 490 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 ERVK-24P63145 666 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 MECOMQ03112 1051 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 SRGAP1Q7Z6B7 1085 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 ACRBPQ8NEB7 543 aa18.76■□□□□ 0.59
SPG11-215ENST00000559193 ZSWIM4Q9H7M6 989 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms