RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 HDLBPQ00341 1268 aaKnown RBP8.75□□□□□ -1.01
TRAF3-206ENST00000558880 NMIQ13287 307 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-206ENST00000558880 SLC9C2Q5TAH2 1124 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 HHIPL2Q6UWX4 724 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 ERICH6Q7L0X2 663 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 VASH1Q7L8A9 365 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-206ENST00000558880 ADAM32Q8TC27 787 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 RILPL2Q969X0 211 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 ZDHHC15Q96MV8 337 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 CDK15Q96Q40 435 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 GPRC5DQ9NZD1 345 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 PGAP2Q9UHJ9 254 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 GJA3Q9Y6H8 435 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 MAST3O60307 1309 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 DOCK2Q92608 1830 aa8.75□□□□□ -1.01
TRAF3-206ENST00000558880 WNT10BO00744 389 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 PRKAB2O43741 272 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 IGSF3O75054 1194 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 FRAT2O75474 233 aaPredicted RBP8.74□□□□□ -1.01
TRAF3-206ENST00000558880 LDHBP07195 334 aaKnown RBP8.74□□□□□ -1.01
TRAF3-206ENST00000558880 CYP7A1P22680 504 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 FSHRP23945 695 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 RPS12P25398 132 aaKnown RBP8.74□□□□□ -1.01
TRAF3-206ENST00000558880 TNIP1Q15025 636 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
TRAF3-206ENST00000558880 NBPF9Q3BBW0 867 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 VPS53Q5VIR6 699 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 CCDC129Q6ZRS4 1044 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 TICAM2Q86XR7 235 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 LCORLQ8N3X6 602 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 MIGA1Q8NAN2 632 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 APPBP2Q92624 585 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 FSD1Q9BTV5 496 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 DDX4Q9NQI0 724 aaKnown RBP8.74□□□□□ -1.01
TRAF3-206ENST00000558880 RAI14Q9P0K7 980 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 LRP2BPQ9P2M1 347 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 CNOT7Q9UIV1 285 aaKnown RBP8.74□□□□□ -1.01
TRAF3-206ENST00000558880 SERPINA10Q9UK55 444 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 TACC3Q9Y6A5 838 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 MROH7-TTC4A0A0A0MT08 1334 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 MYO3BQ8WXR4 1341 aa8.74□□□□□ -1.01
TRAF3-206ENST00000558880 RPAP1Q9BWH6 1393 aaPredicted RBP8.73□□□□□ -1.01
TRAF3-206ENST00000558880 MYO5AQ9Y4I1 1855 aaKnown RBP8.73□□□□□ -1.01
TRAF3-206ENST00000558880 SGSM2O43147 1006 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 CA12O43570 354 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 WDHD1O75717 1129 aaPredicted RBP8.73□□□□□ -1.01
TRAF3-206ENST00000558880 NR3C2P08235 984 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 LMOD1P29536 600 aaPredicted RBP8.73□□□□□ -1.01
TRAF3-206ENST00000558880 GRM5P41594 1212 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 MAP3K12Q12852 859 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 NFIAQ12857 509 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 CTC1Q2NKJ3 1217 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 CFAP100Q494V2 611 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 NAA16Q6N069 864 aaPredicted RBP8.73□□□□□ -1.01
TRAF3-206ENST00000558880 CDC42EP5Q6NZY7 148 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 ZFPM1Q8IX07 1006 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 ZGPATQ8N5A5 531 aaKnown RBP8.73□□□□□ -1.01
TRAF3-206ENST00000558880 SLC10A4Q96EP9 437 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 STRBPQ96SI9 672 aaKnown RBP8.73□□□□□ -1.01
TRAF3-206ENST00000558880 ARMT1Q9H993 441 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 ZNF408Q9H9D4 720 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 EPB41L4AQ9HCS5 686 aaPredicted RBP8.73□□□□□ -1.01
TRAF3-206ENST00000558880 MYOZ2Q9NPC6 264 aa8.73□□□□□ -1.01
TRAF3-206ENST00000558880 GSG1L2A8MUP6 293 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 FBXO45P0C2W1 286 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 SLURP2P0DP57 97 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 MAP2K2P36507 400 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 BTDP43251 543 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 PTH1RQ03431 593 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 COL9A3Q14050 684 aaPredicted RBP8.72□□□□□ -1.01
TRAF3-206ENST00000558880 TBC1D10BQ4KMP7 808 aaPredicted RBP8.72□□□□□ -1.01
TRAF3-206ENST00000558880 CST9Q5W186 159 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 SPTY2D1Q68D10 685 aaPredicted RBP8.72□□□□□ -1.01
TRAF3-206ENST00000558880 CWC27Q6UX04 472 aaKnown RBP8.72□□□□□ -1.01
TRAF3-206ENST00000558880 DLK2Q6UY11 383 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
TRAF3-206ENST00000558880 CRIPAKQ8N1N5 446 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 SH3RF3Q8TEJ3 882 aaPredicted RBP8.72□□□□□ -1.01
TRAF3-206ENST00000558880 ESYT1Q9BSJ8 1104 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 LSG1Q9H089 658 aaKnown RBP8.72□□□□□ -1.01
TRAF3-206ENST00000558880 HELLSQ9NRZ9 838 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 AATFQ9NY61 560 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRAF3-206ENST00000558880 TAF6LQ9Y6J9 622 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 TRPM7Q96QT4 1865 aa8.72□□□□□ -1.01
TRAF3-206ENST00000558880 GPAA1O43292 621 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 GPR37L1O60883 481 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 CDC45O75419 566 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 MBD4O95243 580 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 ZFYP08048 801 aaPredicted RBP8.71□□□□□ -1.02
TRAF3-206ENST00000558880 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
TRAF3-206ENST00000558880 CACNB3P54284 484 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 WDR4P57081 412 aaKnown RBP8.71□□□□□ -1.02
TRAF3-206ENST00000558880 TMEM132AQ24JP5 1023 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 MCMDC2Q4G0Z9 681 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 TMED8Q6PL24 325 aaPredicted RBP8.71□□□□□ -1.02
TRAF3-206ENST00000558880 DZIP1Q86YF9 867 aaKnown RBP8.71□□□□□ -1.02
TRAF3-206ENST00000558880 TEKT1Q969V4 418 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 IDI2Q9BXS1 227 aa8.71□□□□□ -1.02
TRAF3-206ENST00000558880 TDRD3Q9H7E2 651 aaKnown RBP8.71□□□□□ -1.02
TRAF3-206ENST00000558880 SCAF8Q9UPN6 1271 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms