RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 NDFIP2Q9NV92 336 aa12.83□□□□□ -0.36
MARK3-213ENST00000558611 CICQ96RK0 1608 aaPredicted RBP12.83□□□□□ -0.36
MARK3-213ENST00000558611 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
MARK3-213ENST00000558611 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
MARK3-213ENST00000558611 UBR2Q8IWV8 1755 aa12.82□□□□□ -0.36
MARK3-213ENST00000558611 METTL12A8MUP2 240 aa12.82□□□□□ -0.36
MARK3-213ENST00000558611 H7C1W4 665 aa12.82□□□□□ -0.36
MARK3-213ENST00000558611 TRPA1O75762 1119 aa12.82□□□□□ -0.36
MARK3-213ENST00000558611 SMCPP49901 116 aaPredicted RBP12.82□□□□□ -0.36
MARK3-213ENST00000558611 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
MARK3-213ENST00000558611 RNPC3Q96LT9 517 aaKnown RBP12.82□□□□□ -0.36
MARK3-213ENST00000558611 MRC1P22897 1456 aa12.81□□□□□ -0.36
MARK3-213ENST00000558611 HSP90AB1P08238 724 aaKnown RBP12.81□□□□□ -0.36
MARK3-213ENST00000558611 PTPROQ16827 1216 aa12.81□□□□□ -0.36
MARK3-213ENST00000558611 MPRIPQ6WCQ1 1025 aa12.81□□□□□ -0.36
MARK3-213ENST00000558611 RIPOR1Q6ZS17 1223 aa12.81□□□□□ -0.36
MARK3-213ENST00000558611 BHMTQ93088 406 aa12.81□□□□□ -0.36
MARK3-213ENST00000558611 NSUN5Q96P11 429 aaKnown RBP12.81□□□□□ -0.36
MARK3-213ENST00000558611 BRINP2Q9C0B6 783 aa12.81□□□□□ -0.36
MARK3-213ENST00000558611 SAMM50Q9Y512 469 aa12.81□□□□□ -0.36
MARK3-213ENST00000558611 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
MARK3-213ENST00000558611 TJP1Q07157 1748 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 PDE2AO00408 941 aaPredicted RBP12.8□□□□□ -0.36
MARK3-213ENST00000558611 BNIP3LO60238 219 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 FAAP100Q0VG06 881 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 C1orf141Q5JVX7 400 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 GATAD2BQ8WXI9 593 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 KCNB2Q92953 911 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 GPATCH3Q96I76 525 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 SLC30A3Q99726 388 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 LRRC4BQ9NT99 713 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 TMEM39AQ9NV64 488 aa12.8□□□□□ -0.36
MARK3-213ENST00000558611 GPN3Q9UHW5 284 aaPredicted RBP12.8□□□□□ -0.36
MARK3-213ENST00000558611 PAGE1O75459 146 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 LMNB1P20700 586 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 GPLD1P80108 840 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 MPP2Q14168 576 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 SEZ6Q53EL9 994 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 RNF187Q5TA31 235 aaPredicted RBP12.79□□□□□ -0.36
MARK3-213ENST00000558611 TRPM4Q8TD43 1214 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 PIGBQ92521 554 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 HHIPQ96QV1 700 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 PBX4Q9BYU1 374 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 CCDC113Q9H0I3 377 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 TMOD3Q9NYL9 352 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
MARK3-213ENST00000558611 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 SMAD7O15105 426 aaKnown RBP12.78□□□□□ -0.36
MARK3-213ENST00000558611 F13A1P00488 732 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 EIF6P56537 245 aaKnown RBP12.78□□□□□ -0.36
MARK3-213ENST00000558611 SIK1P57059 783 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 PPP2R3AQ06190 1150 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 RALBP1Q15311 655 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 AKAP4Q5JQC9 854 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 OR6P1Q8NGX9 317 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 MIR1-1HGQ9H1L0 117 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 HCN2Q9UL51 889 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 PPT2Q9UMR5 302 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 NUDCQ9Y266 331 aa12.78□□□□□ -0.36
MARK3-213ENST00000558611 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
MARK3-213ENST00000558611 FAM187AA6NFU0 413 aa12.77□□□□□ -0.37
MARK3-213ENST00000558611 GIPRP48546 466 aa12.77□□□□□ -0.37
MARK3-213ENST00000558611 CWF19L2Q2TBE0 894 aaKnown RBP12.77□□□□□ -0.37
MARK3-213ENST00000558611 PLEKHG4Q58EX7 1191 aa12.77□□□□□ -0.37
MARK3-213ENST00000558611 DIEXFQ68CQ4 756 aaKnown RBP12.77□□□□□ -0.37
MARK3-213ENST00000558611 BNC2Q6ZN30 1099 aaPredicted RBP12.77□□□□□ -0.37
MARK3-213ENST00000558611 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.37
MARK3-213ENST00000558611 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
MARK3-213ENST00000558611 CYP8B1Q9UNU6 501 aa12.77□□□□□ -0.37
MARK3-213ENST00000558611 FAM221AA4D161 298 aa12.76□□□□□ -0.37
MARK3-213ENST00000558611 FAM221BA6H8Z2 402 aa12.76□□□□□ -0.37
MARK3-213ENST00000558611 ZNF165P49910 485 aa12.76□□□□□ -0.37
MARK3-213ENST00000558611 ZNF827Q17R98 1081 aa12.76□□□□□ -0.37
MARK3-213ENST00000558611 MTHFSDQ2M296 383 aaKnown RBP12.76□□□□□ -0.37
MARK3-213ENST00000558611 CCDC81Q6ZN84 652 aa12.76□□□□□ -0.37
MARK3-213ENST00000558611 REXO1Q8N1G1 1221 aaKnown RBP12.76□□□□□ -0.37
MARK3-213ENST00000558611 GMCL1Q96IK5 515 aa12.76□□□□□ -0.37
MARK3-213ENST00000558611 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
MARK3-213ENST00000558611 C4AP0C0L4 1744 aa12.76□□□□□ -0.37
MARK3-213ENST00000558611 SLC35F4A4IF30 521 aa12.75□□□□□ -0.37
MARK3-213ENST00000558611 MAN1A2O60476 641 aa12.75□□□□□ -0.37
MARK3-213ENST00000558611 U2AF1L5P0DN76 240 aaPredicted RBP12.75□□□□□ -0.37
MARK3-213ENST00000558611 IBSPP21815 317 aaPredicted RBP12.75□□□□□ -0.37
MARK3-213ENST00000558611 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
MARK3-213ENST00000558611 U2AF1Q01081 240 aaKnown RBP eCLIP12.75□□□□□ -0.37
MARK3-213ENST00000558611 PCSK7Q16549 785 aa12.75□□□□□ -0.37
MARK3-213ENST00000558611 TRIM22Q8IYM9 498 aa12.75□□□□□ -0.37
MARK3-213ENST00000558611 CRBNQ96SW2 442 aa12.75□□□□□ -0.37
MARK3-213ENST00000558611 MAP3K5Q99683 1374 aa12.75□□□□□ -0.37
MARK3-213ENST00000558611 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
MARK3-213ENST00000558611 RASSF4Q9H2L5 321 aa12.75□□□□□ -0.37
MARK3-213ENST00000558611 CLEC4MQ9H2X3 399 aaPredicted RBP12.75□□□□□ -0.37
MARK3-213ENST00000558611 ATXN7L1Q9ULK2 861 aaPredicted RBP12.75□□□□□ -0.37
MARK3-213ENST00000558611 hCG_2014768A0A024R1R8 64 aa12.74□□□□□ -0.37
MARK3-213ENST00000558611 TLR3O15455 904 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms