RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 EEF2P13639 858 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-205ENST00000558534 HERVK_113P62684 666 aa18.69■□□□□ 0.58
RABGGTA-205ENST00000558534 CCNA1P78396 465 aa18.69■□□□□ 0.58
RABGGTA-205ENST00000558534 OTOP1Q7RTM1 612 aa18.69■□□□□ 0.58
RABGGTA-205ENST00000558534 ACER1Q8TDN7 264 aa18.69■□□□□ 0.58
RABGGTA-205ENST00000558534 FOXP2O15409 715 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 RANBP6O60518 1105 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 PRDM1O75626 825 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 FMNL1O95466 1100 aaPredicted RBP18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 FGRP09769 529 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 TFAP4Q01664 338 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 CTDSPL2Q05D32 466 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 AKNAD1Q5T1N1 836 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 LBX2Q6XYB7 198 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 CATSPERGQ6ZRH7 1159 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 CCAR1Q8IX12 1150 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 STAG1Q8WVM7 1258 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 ESR2Q92731 530 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 TANGO6Q9C0B7 1094 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 RPAP3Q9H6T3 665 aaPredicted RBP18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 CNNM2Q9H8M5 875 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 MORF4L1Q9UBU8 362 aa18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.68■□□□□ 0.58
RABGGTA-205ENST00000558534 COG2Q14746 738 aa18.67■□□□□ 0.58
RABGGTA-205ENST00000558534 MB21D1Q8N884 522 aa18.67■□□□□ 0.58
RABGGTA-205ENST00000558534 MKL1Q969V6 931 aa18.67■□□□□ 0.58
RABGGTA-205ENST00000558534 COA7Q96BR5 231 aa18.67■□□□□ 0.58
RABGGTA-205ENST00000558534 MTMR4Q9NYA4 1195 aa18.67■□□□□ 0.58
RABGGTA-205ENST00000558534 RABGAP1Q9Y3P9 1069 aa18.67■□□□□ 0.58
RABGGTA-205ENST00000558534 U3KPZ7 1027 aaPredicted RBP18.67■□□□□ 0.58
RABGGTA-205ENST00000558534 IGKV6D-41A0A0C4DH26 115 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 A0A1W2PRG0 241 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 SGSM2O43147 1006 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 PSMC4P43686 418 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 NBPF11Q86T75 865 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 ANKRD13CQ8N6S4 541 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 GPRC5AQ8NFJ5 357 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 CEP95Q96GE4 821 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 ABHD8Q96I13 439 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 KRT23Q9C075 422 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 CWC22Q9HCG8 908 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 PTPN22Q9Y2R2 807 aa18.66■□□□□ 0.58
RABGGTA-205ENST00000558534 TNPO2O14787 897 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-205ENST00000558534 RAD21O60216 631 aa18.65■□□□□ 0.58
RABGGTA-205ENST00000558534 TRDNQ13061 729 aa18.65■□□□□ 0.58
RABGGTA-205ENST00000558534 IQCA1Q86XH1 822 aa18.65■□□□□ 0.58
RABGGTA-205ENST00000558534 GMCL1P1Q8NEA9 526 aa18.65■□□□□ 0.58
RABGGTA-205ENST00000558534 P2RX7Q99572 595 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-205ENST00000558534 TCP11L1Q9NUJ3 509 aa18.65■□□□□ 0.58
RABGGTA-205ENST00000558534 CLIP2Q9UDT6 1046 aa18.65■□□□□ 0.58
RABGGTA-205ENST00000558534 STX8Q9UNK0 236 aa18.65■□□□□ 0.58
RABGGTA-205ENST00000558534 SMIM22K7EJ46 135 aa18.64■□□□□ 0.57
RABGGTA-205ENST00000558534 FLOT1O75955 427 aa18.64■□□□□ 0.57
RABGGTA-205ENST00000558534 MAPK4P31152 587 aa18.64■□□□□ 0.57
RABGGTA-205ENST00000558534 RRP12Q5JTH9 1297 aaKnown RBP18.64■□□□□ 0.57
RABGGTA-205ENST00000558534 TTC14Q96N46 770 aa18.64■□□□□ 0.57
RABGGTA-205ENST00000558534 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.64■□□□□ 0.57
RABGGTA-205ENST00000558534 F5H6K3 240 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 CDC45O75419 566 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 HAND2P61296 217 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 ERVK-9P63128 1117 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 ERVK-24P63145 666 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 KLRC3Q07444 240 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 FAM47AQ5JRC9 791 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 SIAH1Q8IUQ4 282 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 SRRDQ9UH36 339 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 PARP14Q460N5 1801 aa18.63■□□□□ 0.57
RABGGTA-205ENST00000558534 FDX1P10109 184 aa18.62■□□□□ 0.57
RABGGTA-205ENST00000558534 COPB2P35606 906 aa18.62■□□□□ 0.57
RABGGTA-205ENST00000558534 CLEC10AQ8IUN9 316 aa18.62■□□□□ 0.57
RABGGTA-205ENST00000558534 SPICE1Q8N0Z3 855 aa18.62■□□□□ 0.57
RABGGTA-205ENST00000558534 RAET1EQ8TD07 263 aa18.62■□□□□ 0.57
RABGGTA-205ENST00000558534 PAGR1Q9BTK6 254 aa18.62■□□□□ 0.57
RABGGTA-205ENST00000558534 HPS5Q9UPZ3 1129 aa18.62■□□□□ 0.57
RABGGTA-205ENST00000558534 CTDP1Q9Y5B0 961 aaPredicted RBP18.62■□□□□ 0.57
RABGGTA-205ENST00000558534 A0A0G2JMZ2 1700 aa18.62■□□□□ 0.57
RABGGTA-205ENST00000558534 SPDYE16A6NNV3 312 aaPredicted RBP18.61■□□□□ 0.57
RABGGTA-205ENST00000558534 DSG3P32926 999 aa18.61■□□□□ 0.57
RABGGTA-205ENST00000558534 SLC9C1Q4G0N8 1177 aa18.61■□□□□ 0.57
RABGGTA-205ENST00000558534 SOCS4Q8WXH5 440 aa18.61■□□□□ 0.57
RABGGTA-205ENST00000558534 TRIM47Q96LD4 638 aa18.61■□□□□ 0.57
RABGGTA-205ENST00000558534 TOP1P11387 765 aaKnown RBP18.6■□□□□ 0.57
RABGGTA-205ENST00000558534 RALYLQ86SE5 291 aaKnown RBP18.6■□□□□ 0.57
RABGGTA-205ENST00000558534 GMCL1Q96IK5 515 aa18.6■□□□□ 0.57
RABGGTA-205ENST00000558534 SLF1Q9BQI6 1058 aa18.6■□□□□ 0.57
RABGGTA-205ENST00000558534 ESYT1Q9BSJ8 1104 aa18.6■□□□□ 0.57
RABGGTA-205ENST00000558534 RBPJLQ9UBG7 517 aa18.6■□□□□ 0.57
RABGGTA-205ENST00000558534 FEM1BQ9UK73 627 aa18.6■□□□□ 0.57
RABGGTA-205ENST00000558534 IVNS1ABPQ9Y6Y0 642 aa18.6■□□□□ 0.57
RABGGTA-205ENST00000558534 RLFQ13129 1914 aa18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 EIF5BO60841 1220 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 NDUFB10O96000 172 aa18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 BMP3P12645 472 aa18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 SLC1A4P43007 532 aa18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 IRF5Q13568 498 aa18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 FAM83BQ5T0W9 1011 aa18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 RNF20Q5VTR2 975 aa18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 SLFN13Q68D06 897 aa18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 RCSD1Q6JBY9 416 aa18.59■□□□□ 0.57
RABGGTA-205ENST00000558534 FAM160B2Q86V87 743 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms