RNA–Protein interactions for RNA: ENST00000558478.1

AL136295.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136295.2, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136295.2-201ENST00000558478 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 NOVP48745 357 aa11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 RCSD1Q6JBY9 416 aa11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 RAB11FIP4Q86YS3 637 aa11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 C8orf76Q96K31 380 aa11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 TMEM47Q9BQJ4 181 aa11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 TMEM39BQ9GZU3 492 aa11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 SH2D4AQ9H788 454 aa11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 DNAJC18Q9H819 358 aa11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
AL136295.2-201ENST00000558478 SHTN1A0MZ66 631 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 DDNO94850 711 aaPredicted RBP11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 F13A1P00488 732 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 PARP1P09874 1014 aaKnown RBP11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 CDC27P30260 824 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 ICA1Q05084 483 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 GRM4Q14833 912 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 ASPRV1Q53RT3 343 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 ANGEL2Q5VTE6 544 aaKnown RBP11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 CLEC17AQ6ZS10 378 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 TMTC3Q6ZXV5 915 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 SLC26A6Q9BXS9 759 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 DEFB129Q9H1M3 183 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 ZSCAN16Q9H4T2 348 aaPredicted RBP11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 ARHGEF10LQ9HCE6 1279 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 GGA3Q9NZ52 723 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 NYAP2Q9P242 653 aa11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 GREB1LQ9C091 1923 aaPredicted RBP11.84□□□□□ -0.51
AL136295.2-201ENST00000558478 GLTPD2A6NH11 291 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 EGFRP00533 1210 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 ASNSP08243 561 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 MAP3K10Q02779 954 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 PKP1Q13835 747 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 SAFBQ15424 915 aaKnown RBP eCLIP11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 NTRK3Q16288 839 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 SUPT20HL1Q3ZLR7 823 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 GPATCH4Q5T3I0 446 aaKnown RBP11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 USP50Q70EL3 339 aaPredicted RBP11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 DCPSQ96C86 337 aaKnown RBP11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 ALG1Q9BT22 464 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 MTMR6Q9Y217 621 aa11.83□□□□□ -0.52
AL136295.2-201ENST00000558478 FAM196BA6NMK8 535 aa11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 PRPF3O43395 683 aaKnown RBP11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 SMARCA1P28370 1054 aa11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 EPS15P42566 896 aa11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 ATP2B2Q01814 1243 aa11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 SULF1Q8IWU6 871 aa11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 FAM177A1Q8N128 213 aaPredicted RBP11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 PHKBQ93100 1093 aa11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 BRMS1Q9HCU9 246 aa11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 CLIP2Q9UDT6 1046 aa11.82□□□□□ -0.52
AL136295.2-201ENST00000558478 GDF11O95390 407 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 GH2P01242 217 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 CAP2P40123 477 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 GNL2Q13823 731 aaKnown RBP11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 SEPT2Q15019 361 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 NFKBIBQ15653 356 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 CDC37L1Q7L3B6 337 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 PNMA8AQ86V59 439 aaPredicted RBP11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 LRRC47Q8N1G4 583 aaKnown RBP11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 GMCL1P1Q8NEA9 526 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 DCAF4Q8WV16 495 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 MKL1Q969V6 931 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 SPZ1Q9BXG8 430 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 ZNF341Q9BYN7 854 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 GOPCQ9HD26 462 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 SEC63Q9UGP8 760 aaKnown RBP11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 ZBTB21Q9ULJ3 1066 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 SCN4AP35499 1836 aa11.81□□□□□ -0.52
AL136295.2-201ENST00000558478 PALM3A6NDB9 673 aaPredicted RBP11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 KLRF2D3W0D1 207 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 hCG_1984214I3L0E3 225 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 CTNND1O60716 968 aaKnown RBP11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 PLEKHA8P1O95397 391 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 BAG4O95429 457 aaKnown RBP11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 SNHG28P0DPA3 235 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 PDHBP11177 359 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 EEF2P13639 858 aaKnown RBP11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 FDPSP14324 419 aaKnown RBP11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 MCM4P33991 863 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 EPHX2P34913 555 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 NF2P35240 595 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 FOXD4L5Q5VV16 416 aaPredicted RBP11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 ATL3Q6DD88 541 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 MCTP1Q6DN14 999 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 BRAPQ7Z569 592 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 NBPF11Q86T75 865 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 USP48Q86UV5 1035 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 ZNF713Q8N859 430 aaPredicted RBP11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 CCDC148Q8NFR7 591 aa11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 CCDC12Q8WUD4 166 aaPredicted RBP11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 FOXD4L4Q8WXT5 416 aaPredicted RBP11.8□□□□□ -0.52
AL136295.2-201ENST00000558478 TEPSINQ96N21 525 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms