RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CYP2J2P51589 502 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 CCDC13Q8IYE1 715 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 PLCH2O75038 1416 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 TOPBP1Q92547 1522 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 TNRQ92752 1358 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 SMTNP53814 917 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 IMPACTQ9P2X3 320 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 THRAP3Q9Y2W1 955 aaKnown RBP15.42■□□□□ 0.06
SPG11-210ENST00000558319 PRXQ9BXM0 1461 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 H0YIN7 160 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 SEC31AO94979 1220 aaKnown RBP15.41■□□□□ 0.06
SPG11-210ENST00000558319 RPL13P26373 211 aaKnown RBP15.41■□□□□ 0.06
SPG11-210ENST00000558319 LONRF2Q1L5Z9 754 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 ANO1Q5XXA6 986 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 PPP4R4Q6NUP7 873 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 SNX29Q8TEQ0 813 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 GIPC1O14908 333 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 GNAT2P19087 354 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 SERPINB6P35237 376 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 KIF22Q14807 665 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 ANKRD2Q9GZV1 360 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 C14orf93Q9H972 538 aaKnown RBP15.41■□□□□ 0.06
SPG11-210ENST00000558319 B4DLN1 442 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 SLC27A2O14975 620 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 MRPL12P52815 198 aaKnown RBP15.41■□□□□ 0.06
SPG11-210ENST00000558319 RPS6KA1Q15418 735 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 ARHGAP27Q6ZUM4 889 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 ZNF202O95125 648 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 MMS19Q96T76 1030 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 PDE11AQ9HCR9 933 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 LRRD1A4D1F6 860 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 TNNI1P19237 187 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 ABCB4P21439 1286 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 GTF2IP78347 998 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 VWA3BQ502W6 1294 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 KCTD16Q68DU8 428 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 DCUN1D2Q6PH85 259 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 PEX26Q7Z412 305 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 PDZD8Q8NEN9 1154 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 CFAP61Q8NHU2 1237 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 KLHL14Q9P2G3 628 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 TRIM35Q9UPQ4 493 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
SPG11-210ENST00000558319 SLC1A4P43007 532 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 SLC8A3P57103 927 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 TMED1Q13445 227 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 MTMR3Q13615 1198 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 AFAP1L2Q8N4X5 818 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 SPDL1Q96EA4 605 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 NLRC4Q9NPP4 1024 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 GCP02774 474 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 TROVE2P10155 538 aaKnown RBP eCLIP15.4■□□□□ 0.06
SPG11-210ENST00000558319 RSPH3Q86UC2 560 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 LRRC47Q8N1G4 583 aaKnown RBP15.4■□□□□ 0.06
SPG11-210ENST00000558319 MRFAP1L1Q96HT8 127 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 PHLDB3Q6NSJ2 640 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 SKA2Q8WVK7 121 aaPredicted RBP15.4■□□□□ 0.06
SPG11-210ENST00000558319 XPO4Q9C0E2 1151 aaKnown RBP15.4■□□□□ 0.06
SPG11-210ENST00000558319 SPATS2LQ9NUQ6 558 aaKnown RBP15.4■□□□□ 0.06
SPG11-210ENST00000558319 DENND2AQ9ULE3 1009 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 PPP1R9AQ9ULJ8 1098 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 ARHGAP6O43182 974 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 GPAA1O43292 621 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 PLCG2P16885 1265 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 E2F4Q16254 413 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 PDCD7Q8N8D1 485 aaKnown RBP15.4■□□□□ 0.06
SPG11-210ENST00000558319 GLG1Q92896 1179 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 BUB1O43683 1085 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 PPFIA4O75335 1185 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 HOXC9P31274 260 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 PNOCQ13519 176 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 DPH5Q9H2P9 285 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 AZI2Q9H6S1 392 aa15.4■□□□□ 0.06
SPG11-210ENST00000558319 SCAF11Q99590 1463 aaKnown RBP15.39■□□□□ 0.05
SPG11-210ENST00000558319 RPS6KB1P23443 525 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 ZAP70P43403 619 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 LLGL1Q15334 1064 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 HERC4Q5GLZ8 1057 aaPredicted RBP15.39■□□□□ 0.05
SPG11-210ENST00000558319 TRPC6Q9Y210 931 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 NFE2L3Q9Y4A8 694 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 PCDHB13Q9Y5F0 798 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 RAD50Q92878 1312 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 JAK2O60674 1132 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 IL1RL1Q01638 556 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 TMTC1Q8IUR5 882 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 NELFBQ8WX92 580 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.39■□□□□ 0.05
SPG11-210ENST00000558319 FNDC3AQ9Y2H6 1198 aaKnown RBP15.39■□□□□ 0.05
SPG11-210ENST00000558319 GOLGA8KD6RF30 607 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 PPIP5K2O43314 1243 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 ZNF445P59923 1031 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 KAZNQ674X7 775 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 CNNM4Q6P4Q7 775 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 TTC6Q86TZ1 520 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 CTAGE3PQ8IX95 158 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 ORAI2Q96SN7 254 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 ZNF215Q9UL58 517 aaPredicted RBP15.39■□□□□ 0.05
SPG11-210ENST00000558319 SAR1BQ9Y6B6 198 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 CALUO43852 315 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms