RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 USP17L19D6RCP7 530 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 USP17L20D6RJB6 530 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 GPR25O00155 361 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 NOVP48745 357 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 ATP2B2Q01814 1243 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 USP17L24Q0WX57 530 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 ZYXQ15942 572 aaKnown RBP14.21□□□□□ -0.13
CDK12-203ENST00000558240 GOPCQ9HD26 462 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 IL17RBQ9NRM6 502 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 CLIP2Q9UDT6 1046 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 RLFQ13129 1914 aa14.21□□□□□ -0.14
CDK12-203ENST00000558240 ADGRA2Q96PE1 1338 aa14.2□□□□□ -0.14
CDK12-203ENST00000558240 CYP2C8P10632 490 aa14.2□□□□□ -0.14
CDK12-203ENST00000558240 VCAM1P19320 739 aa14.2□□□□□ -0.14
CDK12-203ENST00000558240 TRDNQ13061 729 aa14.2□□□□□ -0.14
CDK12-203ENST00000558240 NECTIN1Q15223 517 aa14.2□□□□□ -0.14
CDK12-203ENST00000558240 C17orf99Q6UX52 265 aa14.2□□□□□ -0.14
CDK12-203ENST00000558240 CATSPERGQ6ZRH7 1159 aa14.2□□□□□ -0.14
CDK12-203ENST00000558240 ASCC2Q9H1I8 757 aaPredicted RBP14.2□□□□□ -0.14
CDK12-203ENST00000558240 DOCK3Q8IZD9 2030 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 MGAMO43451 1857 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 B4E1Z4 1266 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 FKTNO75072 461 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 REC8O95072 547 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 GCLCP48506 637 aaPredicted RBP14.19□□□□□ -0.14
CDK12-203ENST00000558240 IRX3P78415 501 aaPredicted RBP14.19□□□□□ -0.14
CDK12-203ENST00000558240 CCDC178Q5BJE1 867 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 KIAA1755Q5JYT7 1200 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 IQCA1Q86XH1 822 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 SMCR8Q8TEV9 937 aaPredicted RBP14.19□□□□□ -0.14
CDK12-203ENST00000558240 ZNF296Q8WUU4 475 aaPredicted RBP14.19□□□□□ -0.14
CDK12-203ENST00000558240 TTC14Q96N46 770 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 ZSWIM5Q9P217 1185 aa14.19□□□□□ -0.14
CDK12-203ENST00000558240 E7EWF7 191 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 F5H6K3 240 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 SLC27A2O14975 620 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 WDR46O15213 610 aaKnown RBP14.18□□□□□ -0.14
CDK12-203ENST00000558240 EPB41L2O43491 1005 aaKnown RBP14.18□□□□□ -0.14
CDK12-203ENST00000558240 NMT2O60551 498 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 KDM4AO75164 1064 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 SP3Q02447 781 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 KLRC3Q07444 240 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 RNF20Q5VTR2 975 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 CREB3L3Q68CJ9 461 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 NKX2-3Q8TAU0 364 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 GTF3C2Q8WUA4 911 aaPredicted RBP14.18□□□□□ -0.14
CDK12-203ENST00000558240 P2RX7Q99572 595 aaKnown RBP14.18□□□□□ -0.14
CDK12-203ENST00000558240 RPAP3Q9H6T3 665 aaPredicted RBP14.18□□□□□ -0.14
CDK12-203ENST00000558240 STX8Q9UNK0 236 aa14.18□□□□□ -0.14
CDK12-203ENST00000558240 BCRP11274 1271 aa14.17□□□□□ -0.14
CDK12-203ENST00000558240 HERVK_113P62684 666 aa14.17□□□□□ -0.14
CDK12-203ENST00000558240 DGKHQ86XP1 1220 aa14.17□□□□□ -0.14
CDK12-203ENST00000558240 SPICE1Q8N0Z3 855 aa14.17□□□□□ -0.14
CDK12-203ENST00000558240 NCOA7Q8NI08 942 aa14.17□□□□□ -0.14
CDK12-203ENST00000558240 HOXC10Q9NYD6 342 aa14.17□□□□□ -0.14
CDK12-203ENST00000558240 CPA4Q9UI42 421 aa14.17□□□□□ -0.14
CDK12-203ENST00000558240 GTF3C3Q9Y5Q9 886 aa14.17□□□□□ -0.14
CDK12-203ENST00000558240 TAF6LQ9Y6J9 622 aa14.17□□□□□ -0.14
CDK12-203ENST00000558240 COL11A1P12107 1806 aaPredicted RBP14.16□□□□□ -0.14
CDK12-203ENST00000558240 EIF5BO60841 1220 aaKnown RBP14.16□□□□□ -0.14
CDK12-203ENST00000558240 NDUFB10O96000 172 aa14.16□□□□□ -0.14
CDK12-203ENST00000558240 TOP1P11387 765 aaKnown RBP14.16□□□□□ -0.14
CDK12-203ENST00000558240 COG2Q14746 738 aa14.16□□□□□ -0.14
CDK12-203ENST00000558240 TSGA10IPQ3SY00 556 aa14.16□□□□□ -0.14
CDK12-203ENST00000558240 RCSD1Q6JBY9 416 aa14.16□□□□□ -0.14
CDK12-203ENST00000558240 LBX2Q6XYB7 198 aa14.16□□□□□ -0.14
CDK12-203ENST00000558240 STOX1Q6ZVD7 989 aa14.16□□□□□ -0.14
CDK12-203ENST00000558240 RALYLQ86SE5 291 aaKnown RBP14.16□□□□□ -0.14
CDK12-203ENST00000558240 LRRC47Q8N1G4 583 aaKnown RBP14.16□□□□□ -0.14
CDK12-203ENST00000558240 ANKS1AQ92625 1134 aa14.16□□□□□ -0.14
CDK12-203ENST00000558240 ERO1AQ96HE7 468 aa14.16□□□□□ -0.14
CDK12-203ENST00000558240 ZSCAN10Q96SZ4 725 aaPredicted RBP14.16□□□□□ -0.14
CDK12-203ENST00000558240 TANGO6Q9C0B7 1094 aa14.16□□□□□ -0.14
CDK12-203ENST00000558240 RAD21O60216 631 aa14.15□□□□□ -0.14
CDK12-203ENST00000558240 ARHGEF6Q15052 776 aa14.15□□□□□ -0.14
CDK12-203ENST00000558240 FAM110CQ1W6H9 321 aa14.15□□□□□ -0.14
CDK12-203ENST00000558240 SLFN13Q68D06 897 aa14.15□□□□□ -0.14
CDK12-203ENST00000558240 ANKRD13CQ8N6S4 541 aa14.15□□□□□ -0.14
CDK12-203ENST00000558240 GMCL1Q96IK5 515 aa14.15□□□□□ -0.14
CDK12-203ENST00000558240 TMEM47Q9BQJ4 181 aa14.15□□□□□ -0.14
CDK12-203ENST00000558240 ZKSCAN3Q9BRR0 538 aa14.15□□□□□ -0.14
CDK12-203ENST00000558240 UBAC1Q9BSL1 405 aa14.15□□□□□ -0.14
CDK12-203ENST00000558240 MYPNQ86TC9 1320 aa14.15□□□□□ -0.15
CDK12-203ENST00000558240 FLOT1O75955 427 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 ZKSCAN1P17029 563 aaPredicted RBP14.14□□□□□ -0.15
CDK12-203ENST00000558240 DSG3P32926 999 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 HSPA4P34932 840 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 LACTBP83111 547 aaPredicted RBP14.14□□□□□ -0.15
CDK12-203ENST00000558240 KIF22Q14807 665 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 FAM83BQ5T0W9 1011 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 CYB5R4Q7L1T6 521 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 MB21D2Q8IYB1 491 aaPredicted RBP14.14□□□□□ -0.15
CDK12-203ENST00000558240 ENAHQ8N8S7 591 aaPredicted RBP14.14□□□□□ -0.15
CDK12-203ENST00000558240 KCNB2Q92953 911 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 MTA3Q9BTC8 594 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 RBPJLQ9UBG7 517 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 MORF4L1Q9UBU8 362 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 RABGAP1Q9Y3P9 1069 aa14.14□□□□□ -0.15
CDK12-203ENST00000558240 TNKSO95271 1327 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms