RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 FAM208AQ9UK61 1670 aaKnown RBP8.61□□□□□ -1.03
CLPX-202ENST00000558103 BTAF1O14981 1849 aa8.61□□□□□ -1.03
CLPX-202ENST00000558103 QSER1Q2KHR3 1735 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 WDR17Q8IZU2 1322 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 DLGAP3O95886 979 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 CYP11A1P05108 521 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 CCDC27Q2M243 656 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 EXOSC6Q5RKV6 272 aaKnown RBP8.6□□□□□ -1.03
CLPX-202ENST00000558103 USP26Q9BXU7 913 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 OSBPL7Q9BZF2 842 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 SRCIN1Q9C0H9 1055 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 NRSN2Q9GZP1 204 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 SBNO2Q9Y2G9 1366 aa8.6□□□□□ -1.03
CLPX-202ENST00000558103 EVC2Q86UK5 1308 aa8.59□□□□□ -1.03
CLPX-202ENST00000558103 CD163L1Q9NR16 1453 aa8.59□□□□□ -1.03
CLPX-202ENST00000558103 GOLGB1Q14789 3259 aaKnown RBP8.59□□□□□ -1.03
CLPX-202ENST00000558103 COBLO75128 1261 aa8.59□□□□□ -1.03
CLPX-202ENST00000558103 FAAP100Q0VG06 881 aa8.59□□□□□ -1.03
CLPX-202ENST00000558103 EAPPQ56P03 285 aaPredicted RBP8.59□□□□□ -1.03
CLPX-202ENST00000558103 TMPRSS13Q9BYE2 586 aa8.59□□□□□ -1.03
CLPX-202ENST00000558103 SPG7Q9UQ90 795 aa8.59□□□□□ -1.03
CLPX-202ENST00000558103 TNS2Q63HR2 1409 aa8.59□□□□□ -1.03
CLPX-202ENST00000558103 SHANK3Q9BYB0 1731 aa8.59□□□□□ -1.03
CLPX-202ENST00000558103 CHD4Q14839 1912 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 TTC21BQ7Z4L5 1316 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 COL24A1Q17RW2 1714 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 PLSCR1O15162 318 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 DYRK3O43781 588 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 PRPF40AO75400 957 aaKnown RBP8.58□□□□□ -1.04
CLPX-202ENST00000558103 MAOBP27338 520 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 FGD1P98174 961 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 POU4F3Q15319 338 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 DDB1Q16531 1140 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 TOM1L2Q6ZVM7 507 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 ARHGEF25Q86VW2 580 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 NPAS4Q8IUM7 802 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 FAM46AQ96IP4 442 aaKnown RBP8.58□□□□□ -1.04
CLPX-202ENST00000558103 FRMD6Q96NE9 622 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 TRIM56Q9BRZ2 755 aaKnown RBP8.58□□□□□ -1.04
CLPX-202ENST00000558103 AKAP2Q9Y2D5 859 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 TUBGCP6Q96RT7 1819 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 ROCK2O75116 1388 aaKnown RBP8.58□□□□□ -1.04
CLPX-202ENST00000558103 NINLQ9Y2I6 1382 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 RGPD2P0DJD1 1756 aa8.58□□□□□ -1.04
CLPX-202ENST00000558103 TTC21AQ8NDW8 1320 aa8.57□□□□□ -1.04
CLPX-202ENST00000558103 GSTT1P30711 240 aa8.57□□□□□ -1.04
CLPX-202ENST00000558103 ZNF157P51786 506 aaPredicted RBP8.57□□□□□ -1.04
CLPX-202ENST00000558103 ANKRD34AQ69YU3 496 aa8.57□□□□□ -1.04
CLPX-202ENST00000558103 PTF1AQ7RTS3 328 aa8.57□□□□□ -1.04
CLPX-202ENST00000558103 KCNH5Q8NCM2 988 aa8.57□□□□□ -1.04
CLPX-202ENST00000558103 C3orf58Q8NDZ4 430 aa8.57□□□□□ -1.04
CLPX-202ENST00000558103 SUGCTQ9HAC7 445 aa8.57□□□□□ -1.04
CLPX-202ENST00000558103 TMEM39AQ9NV64 488 aa8.57□□□□□ -1.04
CLPX-202ENST00000558103 KCNQ2O43526 872 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 ERCC3P19447 782 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 AP3B2Q13367 1082 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 PRR23CQ6ZRP0 262 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 MARCH10Q8NA82 808 aaPredicted RBP8.56□□□□□ -1.04
CLPX-202ENST00000558103 SMG8Q8ND04 991 aaKnown RBP8.56□□□□□ -1.04
CLPX-202ENST00000558103 SPON1Q9HCB6 807 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 CYP4F12Q9HCS2 524 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 KAT6BQ8WYB5 2073 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 LY75O60449 1722 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 DOT1LQ8TEK3 1739 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 USP31Q70CQ4 1352 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 KTN1Q86UP2 1357 aaKnown RBP8.56□□□□□ -1.04
CLPX-202ENST00000558103 CCDC7Q96M83 1385 aa8.56□□□□□ -1.04
CLPX-202ENST00000558103 SART1O43290 800 aaKnown RBP8.55□□□□□ -1.04
CLPX-202ENST00000558103 CTSBP07858 339 aa8.55□□□□□ -1.04
CLPX-202ENST00000558103 PPP2R3AQ06190 1150 aa8.55□□□□□ -1.04
CLPX-202ENST00000558103 UVSSAQ2YD98 709 aa8.55□□□□□ -1.04
CLPX-202ENST00000558103 FDX2Q6P4F2 183 aa8.55□□□□□ -1.04
CLPX-202ENST00000558103 ARMC10Q8N2F6 343 aa8.55□□□□□ -1.04
CLPX-202ENST00000558103 C12orf50Q8NA57 414 aaPredicted RBP8.55□□□□□ -1.04
CLPX-202ENST00000558103 SIN3AQ96ST3 1273 aa8.55□□□□□ -1.04
CLPX-202ENST00000558103 DUSP9Q99956 384 aaKnown RBP8.55□□□□□ -1.04
CLPX-202ENST00000558103 CORO1BQ9BR76 489 aa8.55□□□□□ -1.04
CLPX-202ENST00000558103 C12orf49Q9H741 205 aa8.55□□□□□ -1.04
CLPX-202ENST00000558103 ECEL1O95672 775 aa8.54□□□□□ -1.04
CLPX-202ENST00000558103 GNA15P30679 374 aa8.54□□□□□ -1.04
CLPX-202ENST00000558103 PRSS36Q5K4E3 855 aa8.54□□□□□ -1.04
CLPX-202ENST00000558103 HP1BP3Q5SSJ5 553 aaPredicted RBP8.54□□□□□ -1.04
CLPX-202ENST00000558103 PDGFDQ9GZP0 370 aaPredicted RBP8.54□□□□□ -1.04
CLPX-202ENST00000558103 FAM8A1Q9UBU6 413 aa8.54□□□□□ -1.04
CLPX-202ENST00000558103 GPN3Q9UHW5 284 aaPredicted RBP8.54□□□□□ -1.04
CLPX-202ENST00000558103 DHX15O43143 795 aaKnown RBP8.53□□□□□ -1.04
CLPX-202ENST00000558103 PREPP48147 710 aa8.53□□□□□ -1.04
CLPX-202ENST00000558103 ANKRD24Q8TF21 1146 aa8.53□□□□□ -1.04
CLPX-202ENST00000558103 MYRFLQ96LU7 910 aa8.53□□□□□ -1.04
CLPX-202ENST00000558103 RNF19AQ9NV58 838 aa8.53□□□□□ -1.04
CLPX-202ENST00000558103 PPP1R1BQ9UD71 204 aaPredicted RBP8.53□□□□□ -1.04
CLPX-202ENST00000558103 AK5Q9Y6K8 562 aa8.53□□□□□ -1.04
CLPX-202ENST00000558103 EDC4Q6P2E9 1401 aaKnown RBP8.53□□□□□ -1.04
CLPX-202ENST00000558103 A0A1W2PP64 1363 aa8.52□□□□□ -1.05
CLPX-202ENST00000558103 TIAF1O95411 115 aa8.52□□□□□ -1.05
CLPX-202ENST00000558103 YY1P25490 414 aa8.52□□□□□ -1.05
CLPX-202ENST00000558103 SOX4Q06945 474 aaPredicted RBP8.52□□□□□ -1.05
CLPX-202ENST00000558103 TXNRD1Q16881 649 aa8.52□□□□□ -1.05
CLPX-202ENST00000558103 FBXO33Q7Z6M2 555 aa8.52□□□□□ -1.05
CLPX-202ENST00000558103 UTP4Q969X6 686 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms