RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 DDTLA6NHG4 134 aaPredicted RBP9.24□□□□□ -0.93
SPG11-205ENST00000558080 TNRC18O15417 2968 aaPredicted RBP9.24□□□□□ -0.93
SPG11-205ENST00000558080 ENTPD3O75355 529 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 WDHD1O75717 1129 aaPredicted RBP9.24□□□□□ -0.93
SPG11-205ENST00000558080 CETPP11597 493 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 RGS19P49795 217 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 RHBDL3P58872 404 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 GSTO1P78417 241 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 MLLT1Q03111 559 aaPredicted RBP9.24□□□□□ -0.93
SPG11-205ENST00000558080 PPIL2Q13356 520 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 SNAPC2Q13487 334 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 CCDC158Q5M9N0 1113 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 CEP85Q6P2H3 762 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 NSUN4Q96CB9 384 aaKnown RBP9.24□□□□□ -0.93
SPG11-205ENST00000558080 ZFYVE28Q9HCC9 887 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 TLR7Q9NYK1 1049 aaKnown RBP9.24□□□□□ -0.93
SPG11-205ENST00000558080 EXOC6BQ9Y2D4 811 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 COG6Q9Y2V7 657 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 NOP58Q9Y2X3 529 aaKnown RBP9.24□□□□□ -0.93
SPG11-205ENST00000558080 TRIM17Q9Y577 477 aa9.24□□□□□ -0.93
SPG11-205ENST00000558080 CEP290O15078 2479 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 BTBD19C9JJ37 291 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 MS4A1P11836 297 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 ZAP70P43403 619 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 SP3Q02447 781 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 PPATQ06203 517 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 FBXO46Q6PJ61 603 aaPredicted RBP9.23□□□□□ -0.93
SPG11-205ENST00000558080 OTOP1Q7RTM1 612 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.23□□□□□ -0.93
SPG11-205ENST00000558080 EHBP1Q8NDI1 1231 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 EAF2Q96CJ1 260 aaPredicted RBP9.23□□□□□ -0.93
SPG11-205ENST00000558080 ERO1AQ96HE7 468 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 BCL11AQ9H165 835 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 DBNLQ9UJU6 430 aaKnown RBP9.23□□□□□ -0.93
SPG11-205ENST00000558080 RCAN3Q9UKA8 241 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 RFX7Q2KHR2 1363 aa9.23□□□□□ -0.93
SPG11-205ENST00000558080 BAZ2AQ9UIF9 1905 aaKnown RBP9.23□□□□□ -0.93
SPG11-205ENST00000558080 RBBP6Q7Z6E9 1792 aaKnown RBP9.22□□□□□ -0.93
SPG11-205ENST00000558080 PHF20L1A8MW92 1017 aa9.22□□□□□ -0.93
SPG11-205ENST00000558080 APBB1O00213 710 aa9.22□□□□□ -0.93
SPG11-205ENST00000558080 CYP2E1P05181 493 aaPredicted RBP9.22□□□□□ -0.93
SPG11-205ENST00000558080 FDX1P10109 184 aa9.22□□□□□ -0.93
SPG11-205ENST00000558080 CAP1Q01518 475 aa9.22□□□□□ -0.93
SPG11-205ENST00000558080 NOL9Q5SY16 702 aaKnown RBP9.22□□□□□ -0.93
SPG11-205ENST00000558080 NAA16Q6N069 864 aaPredicted RBP9.22□□□□□ -0.93
SPG11-205ENST00000558080 TEX11Q8IYF3 940 aa9.22□□□□□ -0.93
SPG11-205ENST00000558080 SH3RF3Q8TEJ3 882 aaPredicted RBP9.22□□□□□ -0.93
SPG11-205ENST00000558080 NOL10Q9BSC4 688 aaKnown RBP9.22□□□□□ -0.93
SPG11-205ENST00000558080 EFCC1Q9HA90 598 aa9.22□□□□□ -0.93
SPG11-205ENST00000558080 IL1RAPL2Q9NP60 686 aa9.22□□□□□ -0.93
SPG11-205ENST00000558080 PIH1D3Q9NQM4 214 aaKnown RBP9.22□□□□□ -0.93
SPG11-205ENST00000558080 PCDHGC3Q9UN70 934 aa9.22□□□□□ -0.93
SPG11-205ENST00000558080 SUPT16HQ9Y5B9 1047 aaKnown RBP9.22□□□□□ -0.93
SPG11-205ENST00000558080 ATRNL1Q5VV63 1379 aa9.22□□□□□ -0.93
SPG11-205ENST00000558080 FAM196BA6NMK8 535 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 CCNYL3P0C7X3 344 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 AACSQ86V21 672 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 ERC1Q8IUD2 1116 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 SCYL3Q8IZE3 742 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 ZNF512BQ96KM6 892 aaPredicted RBP9.21□□□□□ -0.94
SPG11-205ENST00000558080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.21□□□□□ -0.94
SPG11-205ENST00000558080 PICK1Q9NRD5 415 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 AATFQ9NY61 560 aaKnown RBP eCLIP9.21□□□□□ -0.94
SPG11-205ENST00000558080 DDX19BQ9UMR2 479 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 KCNH4Q9UQ05 1017 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 NDUFB9Q9Y6M9 179 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 NAV1Q8NEY1 1877 aa9.21□□□□□ -0.94
SPG11-205ENST00000558080 LOC285556D6RIA3 1793 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 PDHXO00330 501 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 TLR2O60603 784 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 CTNND1O60716 968 aaKnown RBP9.2□□□□□ -0.94
SPG11-205ENST00000558080 BAG3O95817 575 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 MAP4K4O95819 1239 aaPredicted RBP9.2□□□□□ -0.94
SPG11-205ENST00000558080 PTPRAP18433 802 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 DYNLL1P63167 89 aaKnown RBP9.2□□□□□ -0.94
SPG11-205ENST00000558080 SH3BP2P78314 561 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 MAP3K10Q02779 954 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 HSP90AB4PQ58FF6 505 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 ERICH6BQ5W0A0 696 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 GADL1Q6ZQY3 521 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 ANKRD23Q86SG2 305 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 ADGRA1Q86SQ6 560 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 CCDC84Q86UT8 332 aaPredicted RBP9.2□□□□□ -0.94
SPG11-205ENST00000558080 MAPKAPK5Q8IW41 473 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 RHPN1Q8TCX5 695 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 TGFBRAP1Q8WUH2 860 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 OSBPL5Q9H0X9 879 aaPredicted RBP9.2□□□□□ -0.94
SPG11-205ENST00000558080 ZCCHC17Q9NP64 241 aaKnown RBP9.2□□□□□ -0.94
SPG11-205ENST00000558080 ZBTB40Q9NUA8 1239 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.2□□□□□ -0.94
SPG11-205ENST00000558080 CPA4Q9UI42 421 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 PTPN22Q9Y2R2 807 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 ZHX2Q9Y6X8 837 aa9.2□□□□□ -0.94
SPG11-205ENST00000558080 CXCL11O14625 94 aa9.19□□□□□ -0.94
SPG11-205ENST00000558080 HMMRO75330 724 aa9.19□□□□□ -0.94
SPG11-205ENST00000558080 IDH1O75874 414 aaKnown RBP9.19□□□□□ -0.94
SPG11-205ENST00000558080 CYP7A1P22680 504 aa9.19□□□□□ -0.94
SPG11-205ENST00000558080 MOGSQ13724 837 aa9.19□□□□□ -0.94
SPG11-205ENST00000558080 ARHGEF6Q15052 776 aa9.19□□□□□ -0.94
SPG11-205ENST00000558080 PTPRNQ16849 979 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms