RNA–Protein interactions for RNA: ENST00000557755.5

CGRRF1-209, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-209ENST00000557755 SH3RF3Q8TEJ3 882 aaPredicted RBP13.78□□□□□ -0.2
CGRRF1-209ENST00000557755 SLC28A3Q9HAS3 691 aa13.78□□□□□ -0.2
CGRRF1-209ENST00000557755 ZNF236Q9UL36 1845 aa13.78□□□□□ -0.2
CGRRF1-209ENST00000557755 ZDBF2Q9HCK1 2354 aa13.78□□□□□ -0.2
CGRRF1-209ENST00000557755 USP17L15C9J2P7 530 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 USP17L13C9JLJ4 530 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 USP17L11C9JVI0 530 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 USP17L18D6R9N7 530 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 USP17L22D6RA61 530 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 USP17L17D6RBQ6 530 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 USP17L19D6RCP7 530 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 USP17L20D6RJB6 530 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 IRX5P78411 483 aaPredicted RBP13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 USP17L24Q0WX57 530 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 RAB30Q15771 203 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 CATSPERGQ6ZRH7 1159 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 SLF2Q8IX21 1173 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 ZGPATQ8N5A5 531 aaKnown RBP13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 MOV10L1Q9BXT6 1211 aaKnown RBP13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 PPP1R12CQ9BZL4 782 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 PI4KBQ9UBF8 816 aa13.77□□□□□ -0.21
CGRRF1-209ENST00000557755 EPOPA6NHQ4 379 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 DCDC2CA8MYV0 355 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 VCAM1P19320 739 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 PPIGQ13427 754 aaKnown RBP eCLIP13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 ERICH6Q7L0X2 663 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 MAPKAPK5Q8IW41 473 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 ACER1Q8TDN7 264 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 ANKS1AQ92625 1134 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 UIMC1Q96RL1 719 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 CERS4Q9HA82 394 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 CEP126Q9P2H0 1117 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 PALD1Q9ULE6 856 aa13.76□□□□□ -0.21
CGRRF1-209ENST00000557755 PI4K2BG5E9Z4 385 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 APBB1O00213 710 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 GH2P01242 217 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 RARBP10826 455 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 ERCC3P19447 782 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 TIMM10P62072 90 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 PIP4P2Q8N4L2 257 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 HERVK_113Q902F9 699 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 NSUN4Q96CB9 384 aaKnown RBP13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 C12orf42Q96LP6 360 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 TOX2Q96NM4 488 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 PHOX2BQ99453 314 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 FEZ1Q99689 392 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 STARD7Q9NQZ5 370 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 SAP30BPQ9UHR5 308 aaKnown RBP13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 MTCH2Q9Y6C9 303 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 ZNF318Q5VUA4 2279 aa13.75□□□□□ -0.21
CGRRF1-209ENST00000557755 MYADML2A6NDP7 307 aa13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 CYP2C18P33260 490 aa13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 ACLYP53396 1101 aa13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 DDX10Q13206 875 aaKnown RBP13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 PPP2R2DQ66LE6 453 aa13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 SPTY2D1Q68D10 685 aaPredicted RBP13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 OTOP2Q7RTS6 562 aa13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 RNF180Q86T96 592 aa13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 CRACR2BQ8N4Y2 399 aaPredicted RBP13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 CDCA7LQ96GN5 454 aa13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 MAML3Q96JK9 1138 aa13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 FBXL18Q96ME1 805 aa13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 RPAP3Q9H6T3 665 aaPredicted RBP13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 PA2G4Q9UQ80 394 aaKnown RBP13.74□□□□□ -0.21
CGRRF1-209ENST00000557755 IL16Q14005 1332 aa13.73□□□□□ -0.21
CGRRF1-209ENST00000557755 UMODL1Q5DID0 1318 aa13.73□□□□□ -0.21
CGRRF1-209ENST00000557755 ADAMTS4O75173 837 aa13.73□□□□□ -0.21
CGRRF1-209ENST00000557755 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
CGRRF1-209ENST00000557755 LBX2Q6XYB7 198 aa13.73□□□□□ -0.21
CGRRF1-209ENST00000557755 TGFBRAP1Q8WUH2 860 aa13.73□□□□□ -0.21
CGRRF1-209ENST00000557755 SALL2Q9Y467 1007 aaPredicted RBP13.73□□□□□ -0.21
CGRRF1-209ENST00000557755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.73□□□□□ -0.21
CGRRF1-209ENST00000557755 FOCADQ5VW36 1801 aa13.72□□□□□ -0.21
CGRRF1-209ENST00000557755 PRR33A8MZF0 331 aa13.72□□□□□ -0.21
CGRRF1-209ENST00000557755 PSRC1Q6PGN9 363 aaPredicted RBP13.72□□□□□ -0.21
CGRRF1-209ENST00000557755 AATFQ9NY61 560 aaKnown RBP eCLIP13.72□□□□□ -0.21
CGRRF1-209ENST00000557755 RAI14Q9P0K7 980 aa13.72□□□□□ -0.21
CGRRF1-209ENST00000557755 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
CGRRF1-209ENST00000557755 TRANK1O15050 2925 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 FLT1P17948 1338 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 A0A0G2JMZ2 1700 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 PITPNM1O00562 1244 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 ARHGEF15O94989 841 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 PGK2P07205 417 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 KCNA10Q16322 511 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 TMEM199Q8N511 208 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 TRIM34Q9BYJ4 488 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 SPATC1LQ9H0A9 340 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 DHX36Q9H2U1 1008 aaKnown RBP13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 IL23AQ9NPF7 189 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 WDFY4Q6ZS81 3184 aa13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 MYO5AQ9Y4I1 1855 aaKnown RBP13.71□□□□□ -0.21
CGRRF1-209ENST00000557755 PDS5AQ29RF7 1337 aaKnown RBP13.7□□□□□ -0.22
CGRRF1-209ENST00000557755 ZNF521Q96K83 1311 aa13.7□□□□□ -0.22
CGRRF1-209ENST00000557755 SYNRGQ9UMZ2 1314 aa13.7□□□□□ -0.22
CGRRF1-209ENST00000557755 STRNO43815 780 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms