RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 EMILIN3Q9NT22 766 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 WDR33Q9C0J8 1336 aaKnown RBP17.96■□□□□ 0.47
NEDD1-213ENST00000557644 A0A0G2JLL6 359 aaPredicted RBP17.96■□□□□ 0.47
NEDD1-213ENST00000557644 PRRT2Q7Z6L0 340 aaPredicted RBP17.96■□□□□ 0.47
NEDD1-213ENST00000557644 MTMR7Q9Y216 660 aa17.96■□□□□ 0.47
NEDD1-213ENST00000557644 GTF2A2P52657 109 aa17.95■□□□□ 0.46
NEDD1-213ENST00000557644 MOGSQ13724 837 aa17.95■□□□□ 0.46
NEDD1-213ENST00000557644 SART3Q15020 963 aaKnown RBP17.95■□□□□ 0.46
NEDD1-213ENST00000557644 IFIT1BQ5T764 474 aaKnown RBP17.95■□□□□ 0.46
NEDD1-213ENST00000557644 TTC14Q96N46 770 aa17.95■□□□□ 0.46
NEDD1-213ENST00000557644 LY9Q9HBG7 655 aa17.95■□□□□ 0.46
NEDD1-213ENST00000557644 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
NEDD1-213ENST00000557644 ERICH2A1L162 156 aa17.95■□□□□ 0.46
NEDD1-213ENST00000557644 SH2B2O14492 632 aaPredicted RBP17.95■□□□□ 0.46
NEDD1-213ENST00000557644 KIF23Q02241 960 aaPredicted RBP17.95■□□□□ 0.46
NEDD1-213ENST00000557644 WTAPQ15007 396 aa17.95■□□□□ 0.46
NEDD1-213ENST00000557644 BRI3BPQ8WY22 251 aa17.95■□□□□ 0.46
NEDD1-213ENST00000557644 CCL15-CCL14A0A0B4J2E2 113 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 TOP1P11387 765 aaKnown RBP17.94■□□□□ 0.46
NEDD1-213ENST00000557644 NOGQ13253 232 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 CCL15Q16663 113 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 GADL1Q6ZQY3 521 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 ANKS1AQ92625 1134 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 TMEM87BQ96K49 555 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 VCPKMTQ9H867 229 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 C19orf81C9J6K1 198 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 F5H6K3 240 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 KLRC3Q07444 240 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 CCDC178Q5BJE1 867 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 SH3D19Q5HYK7 790 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 TREML2Q5T2D2 321 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 Q6ZUG5 572 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 PTPN18Q99952 460 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 SH2D4AQ9H788 454 aa17.94■□□□□ 0.46
NEDD1-213ENST00000557644 WDR19Q8NEZ3 1342 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 NDUFB10O96000 172 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 CETPP11597 493 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 PPP4R3BQ5MIZ7 849 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 USP17L2Q6R6M4 530 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 NUP88Q99567 741 aaPredicted RBP17.93■□□□□ 0.46
NEDD1-213ENST00000557644 KAT14Q9H8E8 782 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 PTPRFP10586 1907 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 MYH4Q9Y623 1939 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 USP14P54578 494 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 PNMA1Q8ND90 353 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 LARP6Q9BRS8 491 aaKnown RBP17.93■□□□□ 0.46
NEDD1-213ENST00000557644 MTA3Q9BTC8 594 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 TMOD4Q9NZQ9 345 aa17.93■□□□□ 0.46
NEDD1-213ENST00000557644 MANSC4A6NHS7 340 aaPredicted RBP17.92■□□□□ 0.46
NEDD1-213ENST00000557644 VCAM1P19320 739 aa17.92■□□□□ 0.46
NEDD1-213ENST00000557644 FGD1P98174 961 aa17.92■□□□□ 0.46
NEDD1-213ENST00000557644 GOPCQ9HD26 462 aa17.92■□□□□ 0.46
NEDD1-213ENST00000557644 PDRG1Q9NUG6 133 aa17.92■□□□□ 0.46
NEDD1-213ENST00000557644 NEK4P51957 841 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 SLFN13Q68D06 897 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 GPAT2Q6NUI2 795 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 DNAJC5GQ8N7S2 189 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 GMCL1P1Q8NEA9 526 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 BRF1Q92994 677 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 C12orf42Q96LP6 360 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 MYL10Q9BUA6 226 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 BTBD19C9JJ37 291 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 IGF2BP3O00425 579 aaKnown RBP eCLIP17.91■□□□□ 0.46
NEDD1-213ENST00000557644 LIFRP42702 1097 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 TOB2Q14106 344 aaPredicted RBP17.91■□□□□ 0.46
NEDD1-213ENST00000557644 NFXL1Q6ZNB6 911 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 RAB11FIP4Q86YS3 637 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 FAM43AQ8N2R8 423 aa17.91■□□□□ 0.46
NEDD1-213ENST00000557644 TESPA1A2RU30 521 aaPredicted RBP17.9■□□□□ 0.46
NEDD1-213ENST00000557644 FASTKD5Q7L8L6 764 aaKnown RBP17.9■□□□□ 0.46
NEDD1-213ENST00000557644 PROCA1Q8NCQ7 364 aaPredicted RBP17.9■□□□□ 0.46
NEDD1-213ENST00000557644 BRPF3Q9ULD4 1205 aa17.9■□□□□ 0.46
NEDD1-213ENST00000557644 SYNPO2Q9UMS6 1093 aa17.9■□□□□ 0.46
NEDD1-213ENST00000557644 APOBRQ0VD83 1088 aa17.9■□□□□ 0.46
NEDD1-213ENST00000557644 FAM83BQ5T0W9 1011 aa17.9■□□□□ 0.46
NEDD1-213ENST00000557644 LPAR1Q92633 364 aa17.9■□□□□ 0.46
NEDD1-213ENST00000557644 AGXT2Q9BYV1 514 aa17.9■□□□□ 0.46
NEDD1-213ENST00000557644 RPAP3Q9H6T3 665 aaPredicted RBP17.9■□□□□ 0.46
NEDD1-213ENST00000557644 PDHBP11177 359 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 RXRAP19793 462 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 SGMS1Q86VZ5 419 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 AGTPBP1Q9UPW5 1226 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 CCDC69A6NI79 296 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 MAP2K2P36507 400 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 SLC1A4P43007 532 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 KCTD1Q719H9 257 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 IFNL1Q8IU54 200 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 ZNF654Q8IZM8 581 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 TMTC2Q8N394 836 aa17.89■□□□□ 0.45
NEDD1-213ENST00000557644 FRMPD2Q68DX3 1309 aaPredicted RBP17.88■□□□□ 0.45
NEDD1-213ENST00000557644 TM4SF4P48230 202 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 AK2P54819 239 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 SREBF2Q12772 1141 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 TROAPQ12815 778 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 FBXL16Q8N461 479 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 ISY1Q9ULR0 285 aaKnown RBP17.88■□□□□ 0.45
NEDD1-213ENST00000557644 KLF18A0A0U1RQI7 1052 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 PDHXO00330 501 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 GOLGA8HP0CJ92 632 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 INHBEP58166 350 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms