RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DDX60LQ5H9U9 1706 aaKnown RBP19.14■□□□□ 0.65
TUBB3-213ENST00000557262 CHGBP05060 677 aa19.13■□□□□ 0.65
TUBB3-213ENST00000557262 CDK8P49336 464 aa19.13■□□□□ 0.65
TUBB3-213ENST00000557262 SIAH1Q8IUQ4 282 aa19.13■□□□□ 0.65
TUBB3-213ENST00000557262 C11orf49Q9H6J7 331 aa19.13■□□□□ 0.65
TUBB3-213ENST00000557262 SLC4A4Q9Y6R1 1079 aa19.13■□□□□ 0.65
TUBB3-213ENST00000557262 NAV1Q8NEY1 1877 aa19.13■□□□□ 0.65
TUBB3-213ENST00000557262 CYP2D7A0A087X1C5 515 aa19.12■□□□□ 0.65
TUBB3-213ENST00000557262 AKR1B1P15121 316 aa19.12■□□□□ 0.65
TUBB3-213ENST00000557262 CCND3P30281 292 aaPredicted RBP19.12■□□□□ 0.65
TUBB3-213ENST00000557262 MFSD14CQ5VZR4 134 aa19.12■□□□□ 0.65
TUBB3-213ENST00000557262 LPAR1Q92633 364 aa19.12■□□□□ 0.65
TUBB3-213ENST00000557262 TANGO6Q9C0B7 1094 aa19.12■□□□□ 0.65
TUBB3-213ENST00000557262 PUS7LQ9H0K6 701 aaKnown RBP19.12■□□□□ 0.65
TUBB3-213ENST00000557262 DCTPP1Q9H773 170 aa19.12■□□□□ 0.65
TUBB3-213ENST00000557262 ARHGEF10LQ9HCE6 1279 aa19.12■□□□□ 0.65
TUBB3-213ENST00000557262 ECHDC1Q9NTX5 307 aa19.12■□□□□ 0.65
TUBB3-213ENST00000557262 TMX2Q9Y320 296 aa19.12■□□□□ 0.65
TUBB3-213ENST00000557262 STRNO43815 780 aa19.11■□□□□ 0.65
TUBB3-213ENST00000557262 HOXC6P09630 235 aa19.11■□□□□ 0.65
TUBB3-213ENST00000557262 ATP2B2Q01814 1243 aa19.11■□□□□ 0.65
TUBB3-213ENST00000557262 KIAA1755Q5JYT7 1200 aa19.11■□□□□ 0.65
TUBB3-213ENST00000557262 LHX8Q68G74 356 aa19.11■□□□□ 0.65
TUBB3-213ENST00000557262 C16orf86Q6ZW13 317 aa19.11■□□□□ 0.65
TUBB3-213ENST00000557262 SH2D4AQ9H788 454 aa19.11■□□□□ 0.65
TUBB3-213ENST00000557262 SMIM22K7EJ46 135 aa19.1■□□□□ 0.65
TUBB3-213ENST00000557262 DSG3P32926 999 aa19.1■□□□□ 0.65
TUBB3-213ENST00000557262 ICA1Q05084 483 aa19.1■□□□□ 0.65
TUBB3-213ENST00000557262 GRB14Q14449 540 aa19.1■□□□□ 0.65
TUBB3-213ENST00000557262 CTR9Q6PD62 1173 aa19.1■□□□□ 0.65
TUBB3-213ENST00000557262 MB21D1Q8N884 522 aa19.1■□□□□ 0.65
TUBB3-213ENST00000557262 MOV10L1Q9BXT6 1211 aaKnown RBP19.1■□□□□ 0.65
TUBB3-213ENST00000557262 FLRT1Q9NZU1 646 aa19.1■□□□□ 0.65
TUBB3-213ENST00000557262 STAP2Q9UGK3 403 aa19.1■□□□□ 0.65
TUBB3-213ENST00000557262 A0A1W2PPC1 479 aa19.09■□□□□ 0.65
TUBB3-213ENST00000557262 C7orf61Q8IZ16 206 aa19.09■□□□□ 0.65
TUBB3-213ENST00000557262 SHCBP1Q8NEM2 672 aa19.09■□□□□ 0.65
TUBB3-213ENST00000557262 NPLOC4Q8TAT6 608 aa19.09■□□□□ 0.65
TUBB3-213ENST00000557262 SPATC1LQ9H0A9 340 aa19.09■□□□□ 0.65
TUBB3-213ENST00000557262 VCPKMTQ9H867 229 aa19.09■□□□□ 0.65
TUBB3-213ENST00000557262 KANSL2Q9H9L4 492 aa19.09■□□□□ 0.65
TUBB3-213ENST00000557262 FLOT1O75955 427 aa19.08■□□□□ 0.64
TUBB3-213ENST00000557262 DPP9Q86TI2 863 aa19.08■□□□□ 0.64
TUBB3-213ENST00000557262 CLEC10AQ8IUN9 316 aa19.08■□□□□ 0.64
TUBB3-213ENST00000557262 SPICE1Q8N0Z3 855 aa19.08■□□□□ 0.64
TUBB3-213ENST00000557262 KBTBD3Q8NAB2 608 aa19.08■□□□□ 0.64
TUBB3-213ENST00000557262 GPATCH3Q96I76 525 aa19.08■□□□□ 0.64
TUBB3-213ENST00000557262 STRBPQ96SI9 672 aaKnown RBP19.08■□□□□ 0.64
TUBB3-213ENST00000557262 SZT2Q5T011 3432 aa19.08■□□□□ 0.64
TUBB3-213ENST00000557262 ALPK3Q96L96 1907 aa19.08■□□□□ 0.64
TUBB3-213ENST00000557262 WDR46O15213 610 aaKnown RBP19.07■□□□□ 0.64
TUBB3-213ENST00000557262 COL6A1P12109 1028 aa19.07■□□□□ 0.64
TUBB3-213ENST00000557262 EEF2P13639 858 aaKnown RBP19.07■□□□□ 0.64
TUBB3-213ENST00000557262 ERCC3P19447 782 aa19.07■□□□□ 0.64
TUBB3-213ENST00000557262 ARPP21Q9UBL0 812 aaPredicted RBP19.07■□□□□ 0.64
TUBB3-213ENST00000557262 PFASO15067 1338 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 BAZ2AQ9UIF9 1905 aaKnown RBP19.06■□□□□ 0.64
TUBB3-213ENST00000557262 MSCO60682 206 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 IGHA2P01877 340 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 ADORA2AP29274 412 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 CNGA1P29973 690 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 CYP2C19P33261 490 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 BMP8BP34820 402 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 PLS1Q14651 629 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 SBK1Q52WX2 424 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 GIMAP6Q6P9H5 292 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 ATG4CQ96DT6 458 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 GDF15Q99988 308 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 MROH8Q9H579 483 aa19.06■□□□□ 0.64
TUBB3-213ENST00000557262 ZMYND8Q9ULU4 1186 aaPredicted RBP19.06■□□□□ 0.64
TUBB3-213ENST00000557262 GSG1L2A8MUP6 293 aa19.05■□□□□ 0.64
TUBB3-213ENST00000557262 RNF113AO15541 343 aaKnown RBP19.05■□□□□ 0.64
TUBB3-213ENST00000557262 OLFML2BQ68BL8 750 aa19.05■□□□□ 0.64
TUBB3-213ENST00000557262 APPBP2Q92624 585 aa19.05■□□□□ 0.64
TUBB3-213ENST00000557262 OSBP2Q969R2 916 aa19.05■□□□□ 0.64
TUBB3-213ENST00000557262 SLC5A4Q9NY91 659 aa19.05■□□□□ 0.64
TUBB3-213ENST00000557262 DDX20Q9UHI6 824 aaKnown RBP19.05■□□□□ 0.64
TUBB3-213ENST00000557262 ZFYP08048 801 aaPredicted RBP19.04■□□□□ 0.64
TUBB3-213ENST00000557262 SAMD1Q6SPF0 538 aaPredicted RBP19.04■□□□□ 0.64
TUBB3-213ENST00000557262 NCAPG2Q86XI2 1143 aa19.04■□□□□ 0.64
TUBB3-213ENST00000557262 ABRAQ8N0Z2 381 aa19.04■□□□□ 0.64
TUBB3-213ENST00000557262 GOPCQ9HD26 462 aa19.04■□□□□ 0.64
TUBB3-213ENST00000557262 ADAMTS5Q9UNA0 930 aa19.04■□□□□ 0.64
TUBB3-213ENST00000557262 COBLO75128 1261 aa19.03■□□□□ 0.64
TUBB3-213ENST00000557262 SLC25A27O95847 323 aa19.03■□□□□ 0.64
TUBB3-213ENST00000557262 SYN1P17600 705 aa19.03■□□□□ 0.64
TUBB3-213ENST00000557262 TSHZ3Q63HK5 1081 aa19.03■□□□□ 0.64
TUBB3-213ENST00000557262 TRPV1Q8NER1 839 aa19.03■□□□□ 0.64
TUBB3-213ENST00000557262 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.03■□□□□ 0.64
TUBB3-213ENST00000557262 MKNK2Q9HBH9 465 aa19.03■□□□□ 0.64
TUBB3-213ENST00000557262 MYH7P12883 1935 aa19.03■□□□□ 0.64
TUBB3-213ENST00000557262 RLFQ13129 1914 aa19.03■□□□□ 0.64
TUBB3-213ENST00000557262 MYH8P13535 1937 aa19.02■□□□□ 0.64
TUBB3-213ENST00000557262 MINDY4BA8MYZ0 360 aa19.02■□□□□ 0.64
TUBB3-213ENST00000557262 FCER1AP12319 257 aa19.02■□□□□ 0.64
TUBB3-213ENST00000557262 CYBAP13498 195 aa19.02■□□□□ 0.64
TUBB3-213ENST00000557262 GNAT2P19087 354 aa19.02■□□□□ 0.64
TUBB3-213ENST00000557262 TMEM132BQ14DG7 1078 aa19.02■□□□□ 0.64
TUBB3-213ENST00000557262 LRRC26Q2I0M4 334 aa19.02■□□□□ 0.64
TUBB3-213ENST00000557262 LRRFIP1Q32MZ4 808 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms