RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 HELLSQ9NRZ9 838 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 MORF4L1Q9UBU8 362 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 GABRQQ9UN88 632 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 LOC285556D6RIA3 1793 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 A0A1W2PRG0 241 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 MAPK4P31152 587 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 ERVK-9P63128 1117 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 ERVK-24P63145 666 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 CCDC129Q6ZRS4 1044 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 TICAM2Q86XR7 235 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 PLEKHM2Q8IWE5 1019 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 SPICE1Q8N0Z3 855 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 GOPCQ9HD26 462 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 HOXC10Q9NYD6 342 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 RBPJLQ9UBG7 517 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 TMX2Q9Y320 296 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
SYNE2-226ENST00000557084 PDE4DIPQ5VU43 2346 aa14.2□□□□□ -0.14
SYNE2-226ENST00000557084 PRDM1O75626 825 aa14.2□□□□□ -0.14
SYNE2-226ENST00000557084 EEF2P13639 858 aaKnown RBP14.2□□□□□ -0.14
SYNE2-226ENST00000557084 RASA1P20936 1047 aa14.2□□□□□ -0.14
SYNE2-226ENST00000557084 MFAP1P55081 439 aaKnown RBP14.2□□□□□ -0.14
SYNE2-226ENST00000557084 COG2Q14746 738 aa14.2□□□□□ -0.14
SYNE2-226ENST00000557084 MCMDC2Q4G0Z9 681 aa14.2□□□□□ -0.14
SYNE2-226ENST00000557084 WDR78Q5VTH9 848 aa14.2□□□□□ -0.14
SYNE2-226ENST00000557084 TXNRD2Q9NNW7 524 aa14.2□□□□□ -0.14
SYNE2-226ENST00000557084 TNRC18O15417 2968 aaPredicted RBP14.2□□□□□ -0.14
SYNE2-226ENST00000557084 POTEFA5A3E0 1075 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 PEX10O60683 326 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 FLOT1O75955 427 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 TSPY3P0CV98 308 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 TSPY8P0CW00 308 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 ELNP15502 786 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 PPARAQ07869 468 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 IRF5Q13568 498 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 PXYLP1Q8TE99 480 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 OSBPL3Q9H4L5 887 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 DIAPH3Q9NSV4 1193 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 ZSWIM8A7E2V4 1837 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 ROBO3Q96MS0 1386 aa14.19□□□□□ -0.14
SYNE2-226ENST00000557084 BRCA2P51587 3418 aa14.18□□□□□ -0.14
SYNE2-226ENST00000557084 EN2P19622 333 aaPredicted RBP14.18□□□□□ -0.14
SYNE2-226ENST00000557084 NMIQ13287 307 aaPredicted RBP14.18□□□□□ -0.14
SYNE2-226ENST00000557084 PLEKHH3Q7Z736 793 aa14.18□□□□□ -0.14
SYNE2-226ENST00000557084 SIAH1Q8IUQ4 282 aa14.18□□□□□ -0.14
SYNE2-226ENST00000557084 SOCS4Q8WXH5 440 aa14.18□□□□□ -0.14
SYNE2-226ENST00000557084 NUDT12Q9BQG2 462 aa14.18□□□□□ -0.14
SYNE2-226ENST00000557084 RNF208Q9H0X6 261 aa14.18□□□□□ -0.14
SYNE2-226ENST00000557084 IVNS1ABPQ9Y6Y0 642 aa14.18□□□□□ -0.14
SYNE2-226ENST00000557084 MKI67P46013 3256 aaKnown RBP14.18□□□□□ -0.14
SYNE2-226ENST00000557084 A0A0D9SFI3 127 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 SPDYE16A6NNV3 312 aaPredicted RBP14.17□□□□□ -0.14
SYNE2-226ENST00000557084 HIP1O00291 1037 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 WDR46O15213 610 aaKnown RBP14.17□□□□□ -0.14
SYNE2-226ENST00000557084 INHAP05111 366 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 CCL5P13501 91 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 PLS1Q14651 629 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 MTFR1Q15390 333 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 Q3C1V9 767 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 MB21D1Q8N884 522 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 NKX2-3Q8TAU0 364 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 PORCNQ9H237 461 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 TOMM22Q9NS69 142 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 CLIP2Q9UDT6 1046 aa14.17□□□□□ -0.14
SYNE2-226ENST00000557084 MYH8P13535 1937 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 SDSP20132 328 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 CYP2B6P20813 491 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 TFAP4Q01664 338 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 CTDSPL2Q05D32 466 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 KIAA1755Q5JYT7 1200 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 PPP4R3BQ5MIZ7 849 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 VPS53Q5VIR6 699 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 LBX2Q6XYB7 198 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 GPR142Q7Z601 462 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.16□□□□□ -0.14
SYNE2-226ENST00000557084 NYAP2Q9P242 653 aa14.16□□□□□ -0.14
SYNE2-226ENST00000557084 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
SYNE2-226ENST00000557084 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 TSPY2A6NKD2 308 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 RANBP6O60518 1105 aaKnown RBP14.15□□□□□ -0.14
SYNE2-226ENST00000557084 CNMDO75829 334 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 TTLL1O95922 423 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 HMGCRP04035 888 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 RGS2P41220 211 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 ALX1Q15699 326 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 FAM47AQ5JRC9 791 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 FAM83BQ5T0W9 1011 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 CWC27Q6UX04 472 aaKnown RBP14.15□□□□□ -0.14
SYNE2-226ENST00000557084 TRMT44Q8IYL2 757 aaKnown RBP14.15□□□□□ -0.14
SYNE2-226ENST00000557084 UNC93B1Q9H1C4 597 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 BTBD7Q9P203 1132 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 GJD2Q9UKL4 321 aa14.15□□□□□ -0.14
SYNE2-226ENST00000557084 CTDP1Q9Y5B0 961 aaPredicted RBP14.15□□□□□ -0.14
SYNE2-226ENST00000557084 F5H6K3 240 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 FGAP02671 866 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 GJB1P08034 283 aa14.14□□□□□ -0.15
SYNE2-226ENST00000557084 HSPD1P10809 573 aaKnown RBP14.14□□□□□ -0.15
SYNE2-226ENST00000557084 ZKSCAN1P17029 563 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms