RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 GPR153Q6NV75 609 aa22.14■■□□□ 1.13
VIPAS39-209ENST00000556909 TANGO6Q9C0B7 1094 aa22.14■■□□□ 1.13
VIPAS39-209ENST00000556909 UBE2OQ9C0C9 1292 aaKnown RBP22.14■■□□□ 1.13
VIPAS39-209ENST00000556909 DDX20Q9UHI6 824 aaKnown RBP22.14■■□□□ 1.13
VIPAS39-209ENST00000556909 LTBP2Q14767 1821 aa22.14■■□□□ 1.13
VIPAS39-209ENST00000556909 ZNFX1Q9P2E3 1918 aaKnown RBP22.14■■□□□ 1.13
VIPAS39-209ENST00000556909 IGHA2P01877 340 aa22.13■■□□□ 1.13
VIPAS39-209ENST00000556909 ATP2B2Q01814 1243 aa22.13■■□□□ 1.13
VIPAS39-209ENST00000556909 COG2Q14746 738 aa22.13■■□□□ 1.13
VIPAS39-209ENST00000556909 TMEM179Q6ZVK1 233 aa22.13■■□□□ 1.13
VIPAS39-209ENST00000556909 SIRT2Q8IXJ6 389 aa22.13■■□□□ 1.13
VIPAS39-209ENST00000556909 MOV10L1Q9BXT6 1211 aaKnown RBP22.13■■□□□ 1.13
VIPAS39-209ENST00000556909 MSCO60682 206 aa22.12■■□□□ 1.13
VIPAS39-209ENST00000556909 HMMRO75330 724 aa22.12■■□□□ 1.13
VIPAS39-209ENST00000556909 MS4A1P11836 297 aa22.12■■□□□ 1.13
VIPAS39-209ENST00000556909 CYP2C19P33261 490 aa22.12■■□□□ 1.13
VIPAS39-209ENST00000556909 KIAA1755Q5JYT7 1200 aa22.12■■□□□ 1.13
VIPAS39-209ENST00000556909 RPAP2Q8IXW5 612 aaPredicted RBP22.12■■□□□ 1.13
VIPAS39-209ENST00000556909 TRPV1Q8NER1 839 aa22.12■■□□□ 1.13
VIPAS39-209ENST00000556909 ARMT1Q9H993 441 aa22.12■■□□□ 1.13
VIPAS39-209ENST00000556909 SWAP70Q9UH65 585 aa22.12■■□□□ 1.13
VIPAS39-209ENST00000556909 CYBAP13498 195 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 ADORA2AP29274 412 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 CNGA1P29973 690 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 SLFNL1Q499Z3 407 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 CLEC10AQ8IUN9 316 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 LPAR1Q92633 364 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 DYNLL2Q96FJ2 89 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 SPATC1LQ9H0A9 340 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 BCL11AQ9H165 835 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 PAG1Q9NWQ8 432 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 HOXC10Q9NYD6 342 aa22.11■■□□□ 1.13
VIPAS39-209ENST00000556909 MBD4O95243 580 aa22.1■■□□□ 1.13
VIPAS39-209ENST00000556909 AKR1B1P15121 316 aa22.1■■□□□ 1.13
VIPAS39-209ENST00000556909 ADD2P35612 726 aa22.1■■□□□ 1.13
VIPAS39-209ENST00000556909 SENP6Q9GZR1 1112 aaPredicted RBP22.1■■□□□ 1.13
VIPAS39-209ENST00000556909 ZBTB40Q9NUA8 1239 aa22.1■■□□□ 1.13
VIPAS39-209ENST00000556909 PLXNA1Q9UIW2 1896 aa22.1■■□□□ 1.13
VIPAS39-209ENST00000556909 DDX19BQ9UMR2 479 aa22.1■■□□□ 1.13
VIPAS39-209ENST00000556909 COG6Q9Y2V7 657 aa22.1■■□□□ 1.13
VIPAS39-209ENST00000556909 LAMA2P24043 3122 aaKnown RBP22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 DNM1LO00429 736 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 PRKAB2O43741 272 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 RAB11FIP3O75154 756 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 ERCC3P19447 782 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 MDM2Q00987 491 aaPredicted RBP22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 OLFML2BQ68BL8 750 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 Q7L0L9 218 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 DPP9Q86TI2 863 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 DEFB123Q8N688 67 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 MB21D1Q8N884 522 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 SLC17A8Q8NDX2 589 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 SHCBP1Q8NEM2 672 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 BOLA2Q9H3K6 86 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 ARHGEF10LQ9HCE6 1279 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 ATP8A2Q9NTI2 1148 aa22.09■■□□□ 1.13
VIPAS39-209ENST00000556909 GREB1LQ9C091 1923 aaPredicted RBP22.08■■□□□ 1.13
VIPAS39-209ENST00000556909 SMIM22K7EJ46 135 aa22.08■■□□□ 1.13
VIPAS39-209ENST00000556909 STRNO43815 780 aa22.08■■□□□ 1.13
VIPAS39-209ENST00000556909 ICA1Q05084 483 aa22.08■■□□□ 1.13
VIPAS39-209ENST00000556909 SIAH1Q8IUQ4 282 aa22.08■■□□□ 1.13
VIPAS39-209ENST00000556909 FLOT1O75955 427 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 CHGBP05060 677 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 ATP5JP18859 108 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 DSG3P32926 999 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 SPICE1Q8N0Z3 855 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 ATG4CQ96DT6 458 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 HAUS7Q99871 368 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 SH2D4AQ9H788 454 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 VCPKMTQ9H867 229 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 TMX2Q9Y320 296 aa22.07■■□□□ 1.12
VIPAS39-209ENST00000556909 CYP2D7A0A087X1C5 515 aa22.06■■□□□ 1.12
VIPAS39-209ENST00000556909 COBLO75128 1261 aa22.06■■□□□ 1.12
VIPAS39-209ENST00000556909 ATN1P54259 1190 aaPredicted RBP22.06■■□□□ 1.12
VIPAS39-209ENST00000556909 PLS1Q14651 629 aa22.06■■□□□ 1.12
VIPAS39-209ENST00000556909 C12orf60Q5U649 245 aa22.06■■□□□ 1.12
VIPAS39-209ENST00000556909 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.06■■□□□ 1.12
VIPAS39-209ENST00000556909 MROH8Q9H579 483 aa22.06■■□□□ 1.12
VIPAS39-209ENST00000556909 A0A0C4DFX4 3053 aa22.06■■□□□ 1.12
VIPAS39-209ENST00000556909 NCAPG2Q86XI2 1143 aa22.05■■□□□ 1.12
VIPAS39-209ENST00000556909 ABRAQ8N0Z2 381 aa22.05■■□□□ 1.12
VIPAS39-209ENST00000556909 SMCHD1A6NHR9 2005 aa22.05■■□□□ 1.12
VIPAS39-209ENST00000556909 WDR46O15213 610 aaKnown RBP22.04■■□□□ 1.12
VIPAS39-209ENST00000556909 CDK8P49336 464 aa22.04■■□□□ 1.12
VIPAS39-209ENST00000556909 RTP1P59025 263 aa22.04■■□□□ 1.12
VIPAS39-209ENST00000556909 GJC2Q5T442 439 aaPredicted RBP22.04■■□□□ 1.12
VIPAS39-209ENST00000556909 ANO1Q5XXA6 986 aa22.04■■□□□ 1.12
VIPAS39-209ENST00000556909 DIEXFQ68CQ4 756 aaKnown RBP22.04■■□□□ 1.12
VIPAS39-209ENST00000556909 C16orf86Q6ZW13 317 aa22.04■■□□□ 1.12
VIPAS39-209ENST00000556909 AMOTL1Q8IY63 956 aa22.04■■□□□ 1.12
VIPAS39-209ENST00000556909 CCDC17Q96LX7 622 aa22.04■■□□□ 1.12
VIPAS39-209ENST00000556909 USP17L12C9JPN9 530 aa22.03■■□□□ 1.12
VIPAS39-209ENST00000556909 USP17L21D6R901 530 aa22.03■■□□□ 1.12
VIPAS39-209ENST00000556909 SEPT4O43236 478 aa22.03■■□□□ 1.12
VIPAS39-209ENST00000556909 UBE3CQ15386 1083 aa22.03■■□□□ 1.12
VIPAS39-209ENST00000556909 LBHD1Q9BQE6 289 aaPredicted RBP22.03■■□□□ 1.12
VIPAS39-209ENST00000556909 MTMR10Q9NXD2 777 aa22.03■■□□□ 1.12
VIPAS39-209ENST00000556909 SLC5A4Q9NY91 659 aa22.03■■□□□ 1.12
VIPAS39-209ENST00000556909 CUL9Q8IWT3 2517 aa22.03■■□□□ 1.12
VIPAS39-209ENST00000556909 TMEM132BQ14DG7 1078 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms