RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 FMNL1O95466 1100 aaPredicted RBP12.77□□□□□ -0.37
IFT43-212ENST00000556742 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.37
IFT43-212ENST00000556742 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.37
IFT43-212ENST00000556742 ZNF589Q86UQ0 364 aaPredicted RBP12.77□□□□□ -0.37
IFT43-212ENST00000556742 VCPKMTQ9H867 229 aa12.77□□□□□ -0.37
IFT43-212ENST00000556742 NYAP2Q9P242 653 aa12.77□□□□□ -0.37
IFT43-212ENST00000556742 SRRDQ9UH36 339 aa12.77□□□□□ -0.37
IFT43-212ENST00000556742 SYNPO2Q9UMS6 1093 aa12.77□□□□□ -0.37
IFT43-212ENST00000556742 ZNF236Q9UL36 1845 aa12.76□□□□□ -0.37
IFT43-212ENST00000556742 IGKV6D-41A0A0C4DH26 115 aa12.76□□□□□ -0.37
IFT43-212ENST00000556742 FGAP02671 866 aa12.76□□□□□ -0.37
IFT43-212ENST00000556742 FGRP09769 529 aa12.76□□□□□ -0.37
IFT43-212ENST00000556742 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
IFT43-212ENST00000556742 NEDD1Q8NHV4 660 aa12.76□□□□□ -0.37
IFT43-212ENST00000556742 ARMC5Q96C12 935 aa12.76□□□□□ -0.37
IFT43-212ENST00000556742 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
IFT43-212ENST00000556742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
IFT43-212ENST00000556742 PTCH2Q9Y6C5 1203 aa12.76□□□□□ -0.37
IFT43-212ENST00000556742 MYPNQ86TC9 1320 aa12.76□□□□□ -0.37
IFT43-212ENST00000556742 TNPO2O14787 897 aaKnown RBP12.75□□□□□ -0.37
IFT43-212ENST00000556742 WDR46O15213 610 aaKnown RBP12.75□□□□□ -0.37
IFT43-212ENST00000556742 PRDM1O75626 825 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 PCP11498 1178 aaKnown RBP12.75□□□□□ -0.37
IFT43-212ENST00000556742 NT5C2P49902 561 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 COG2Q14746 738 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 NBPF11Q86T75 865 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 CLEC10AQ8IUN9 316 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 RAD50Q92878 1312 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 MKL1Q969V6 931 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 RBPJLQ9UBG7 517 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 RABGAP1Q9Y3P9 1069 aa12.75□□□□□ -0.37
IFT43-212ENST00000556742 PLXNA1Q9UIW2 1896 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 ORC4O43929 436 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 TSPY3P0CV98 308 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 TSPY8P0CW00 308 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 RGS19P49795 217 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 ERVK-9P63128 1117 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 ERVK-24P63145 666 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 CTDSPL2Q05D32 466 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 IRF5Q13568 498 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 SLC9C1Q4G0N8 1177 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 KIAA1755Q5JYT7 1200 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 COA7Q96BR5 231 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 TXNRD2Q9NNW7 524 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 MTMR4Q9NYA4 1195 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 HOXC10Q9NYD6 342 aa12.74□□□□□ -0.37
IFT43-212ENST00000556742 MKI67P46013 3256 aaKnown RBP12.74□□□□□ -0.37
IFT43-212ENST00000556742 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
IFT43-212ENST00000556742 TTLL1O95922 423 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 MAPK4P31152 587 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 TFAP4Q01664 338 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 ATP2B2Q01814 1243 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 PRKCZQ05513 592 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 POTEEQ6S8J3 1075 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 MB21D1Q8N884 522 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 RAET1EQ8TD07 263 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 RUFY2Q8WXA3 655 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 ZNF333Q96JL9 665 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 TANGO6Q9C0B7 1094 aa12.73□□□□□ -0.37
IFT43-212ENST00000556742 TSPY2A6NKD2 308 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 F5H6K3 240 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 GRK4P32298 578 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 DSG3P32926 999 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 CCNA1P78396 465 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 KLRC3Q07444 240 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 POTEHQ6S545 545 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 SPICE1Q8N0Z3 855 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 GMCL1P1Q8NEA9 526 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 PXYLP1Q8TE99 480 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 PAGR1Q9BTK6 254 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 GABRQQ9UN88 632 aa12.72□□□□□ -0.37
IFT43-212ENST00000556742 ZNF213O14771 459 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 CNMDO75829 334 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 FLOT1O75955 427 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.37
IFT43-212ENST00000556742 NEFLP07196 543 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 CHMLP26374 656 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 NOVP48745 357 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 FLT3LGP49771 235 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 Q3C1V9 767 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 FAM47AQ5JRC9 791 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 AKNAD1Q5T1N1 836 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 STAG1Q8WVM7 1258 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 SOCS4Q8WXH5 440 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 CCDC136Q96JN2 1154 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
IFT43-212ENST00000556742 CTNNA3Q9UI47 895 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 ADAMTS5Q9UNA0 930 aa12.71□□□□□ -0.37
IFT43-212ENST00000556742 MYH6P13533 1939 aa12.7□□□□□ -0.38
IFT43-212ENST00000556742 FRMPD3Q5JV73 1810 aa12.7□□□□□ -0.38
IFT43-212ENST00000556742 PDE4DIPQ5VU43 2346 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms