RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 COA7Q96BR5 231 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 PORCNQ9H237 461 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-224ENST00000556737 COL11A1P12107 1806 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-224ENST00000556737 PDE4DIPQ5VU43 2346 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 IGKV6D-41A0A0C4DH26 115 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 A0A0D9SFI3 127 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 PATL2C9JE40 543 aaKnown RBP12.35□□□□□ -0.43
SHMT2-224ENST00000556737 INHAP05111 366 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 CCL5P13501 91 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 PAGR1Q9BTK6 254 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 VCPKMTQ9H867 229 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 ARHGEF10LQ9HCE6 1279 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 RABGAP1Q9Y3P9 1069 aa12.35□□□□□ -0.43
SHMT2-224ENST00000556737 MINDY4BA8MYZ0 360 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
SHMT2-224ENST00000556737 VPS53Q5VIR6 699 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 STK11IPQ8N1F8 1099 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 LPAR1Q92633 364 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 USP6NLQ92738 828 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 FAM227BQ96M60 508 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 TMEM106CQ9BVX2 250 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 UNC93B1Q9H1C4 597 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 OSBPL3Q9H4L5 887 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 FRMPD3Q5JV73 1810 aa12.34□□□□□ -0.43
SHMT2-224ENST00000556737 WDR46O15213 610 aaKnown RBP12.33□□□□□ -0.44
SHMT2-224ENST00000556737 PRDM1O75626 825 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 MAPK4P31152 587 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 UBXN2AP68543 259 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 PPARAQ07869 468 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 TRIM32Q13049 653 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 GPR142Q7Z601 462 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 SPICE1Q8N0Z3 855 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 SOCS4Q8WXH5 440 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 TRIB2Q92519 343 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 TANGO6Q9C0B7 1094 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 SH2D4AQ9H788 454 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 KANSL2Q9H9L4 492 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.33□□□□□ -0.44
SHMT2-224ENST00000556737 TACC3Q9Y6A5 838 aa12.33□□□□□ -0.44
SHMT2-224ENST00000556737 APPP05067 770 aa12.32□□□□□ -0.44
SHMT2-224ENST00000556737 GJB1P08034 283 aa12.32□□□□□ -0.44
SHMT2-224ENST00000556737 GJA8P48165 433 aa12.32□□□□□ -0.44
SHMT2-224ENST00000556737 NMIQ13287 307 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-224ENST00000556737 MORN1Q5T089 497 aa12.32□□□□□ -0.44
SHMT2-224ENST00000556737 UBE2Q1Q7Z7E8 422 aa12.32□□□□□ -0.44
SHMT2-224ENST00000556737 ZNF589Q86UQ0 364 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-224ENST00000556737 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
SHMT2-224ENST00000556737 NACAP1Q9BZK3 213 aa12.32□□□□□ -0.44
SHMT2-224ENST00000556737 NAPBQ9H115 298 aa12.32□□□□□ -0.44
SHMT2-224ENST00000556737 PAK6Q9NQU5 681 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-224ENST00000556737 HELLSQ9NRZ9 838 aa12.32□□□□□ -0.44
SHMT2-224ENST00000556737 HMGCRP04035 888 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 PDE4AP27815 886 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 DSG3P32926 999 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 ATP2B2Q01814 1243 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 COG2Q14746 738 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 MAP3K21Q5TCX8 1036 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 PLEKHH3Q7Z736 793 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 ATG4CQ96DT6 458 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 CEP95Q96GE4 821 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 APBA2Q99767 749 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 NUDT12Q9BQG2 462 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 RNF208Q9H0X6 261 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 MKNK2Q9HBH9 465 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 NYAP2Q9P242 653 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 BIN2Q9UBW5 565 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-224ENST00000556737 ZMYM6O95789 1325 aa12.31□□□□□ -0.44
SHMT2-224ENST00000556737 FLOT1O75955 427 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 XRCC5P13010 732 aaKnown RBP12.3□□□□□ -0.44
SHMT2-224ENST00000556737 GRB14Q14449 540 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 CCL14Q16627 93 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 MCMDC2Q4G0Z9 681 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 FAM83BQ5T0W9 1011 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 PRPF38BQ5VTL8 546 aaKnown RBP12.3□□□□□ -0.44
SHMT2-224ENST00000556737 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 U2AF1L4Q8WU68 220 aaKnown RBP12.3□□□□□ -0.44
SHMT2-224ENST00000556737 MOV10L1Q9BXT6 1211 aaKnown RBP12.3□□□□□ -0.44
SHMT2-224ENST00000556737 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.3□□□□□ -0.446e-7■□□□□ 8.9
SHMT2-224ENST00000556737 GOPCQ9HD26 462 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 FBXO28Q9NVF7 368 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 ADAMTS5Q9UNA0 930 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
SHMT2-224ENST00000556737 ALPK3Q96L96 1907 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 TRIM6-TRIM34B2RNG4 842 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 NDUFB10O96000 172 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 CYP2B6P20813 491 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 PTPREP23469 700 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 RGS2P41220 211 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 CCNA1P78396 465 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 CTDSPL2Q05D32 466 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 PDE4BQ07343 736 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 MAP2K5Q13163 448 aa12.29□□□□□ -0.44
SHMT2-224ENST00000556737 ALX1Q15699 326 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms