RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ANTXR1Q9H6X2 564 aa14.44□□□□□ -0.1
ACTN1-221ENST00000556571 ERCC3P19447 782 aa14.43□□□□□ -0.1
ACTN1-221ENST00000556571 GABPAQ06546 454 aa14.43□□□□□ -0.1
ACTN1-221ENST00000556571 CDX2Q99626 313 aaPredicted RBP14.43□□□□□ -0.1
ACTN1-221ENST00000556571 TANGO6Q9C0B7 1094 aa14.43□□□□□ -0.1
ACTN1-221ENST00000556571 SEMA6BQ9H3T3 888 aa14.43□□□□□ -0.1
ACTN1-221ENST00000556571 MROH8Q9H579 483 aa14.43□□□□□ -0.1
ACTN1-221ENST00000556571 PRDM5Q9NQX1 630 aaPredicted RBP14.43□□□□□ -0.1
ACTN1-221ENST00000556571 TTC28Q96AY4 2481 aa14.43□□□□□ -0.1
ACTN1-221ENST00000556571 MAGEB6P1A0A0J9YX57 407 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 A0A1W2PRG0 241 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 MPHOSPH10O00566 681 aaKnown RBP14.42□□□□□ -0.1
ACTN1-221ENST00000556571 COBLO75128 1261 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 MYCNP04198 464 aaPredicted RBP14.42□□□□□ -0.1
ACTN1-221ENST00000556571 SMAD3P84022 425 aaKnown RBP14.42□□□□□ -0.1
ACTN1-221ENST00000556571 SNX17Q15036 470 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 TRIM60Q495X7 471 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 C9orf50Q5SZB4 431 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 C1orf53Q5VUE5 145 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 ANO1Q5XXA6 986 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 ABRAQ8N0Z2 381 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 BADQ92934 168 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 CRNKL1Q9BZJ0 848 aaKnown RBP14.42□□□□□ -0.1
ACTN1-221ENST00000556571 C1orf115Q9H7X2 142 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 MCM9Q9NXL9 1143 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 MYH1P12882 1939 aa14.42□□□□□ -0.1
ACTN1-221ENST00000556571 DSG3P32926 999 aa14.41□□□□□ -0.1
ACTN1-221ENST00000556571 ADCYAP1R1P41586 468 aa14.41□□□□□ -0.1
ACTN1-221ENST00000556571 TTF1Q15361 905 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-221ENST00000556571 DIEXFQ68CQ4 756 aaKnown RBP14.41□□□□□ -0.1
ACTN1-221ENST00000556571 MAFAQ8NHW3 353 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-221ENST00000556571 PDLIM7Q9NR12 457 aa14.41□□□□□ -0.1
ACTN1-221ENST00000556571 MYO5AQ9Y4I1 1855 aaKnown RBP14.4□□□□□ -0.1
ACTN1-221ENST00000556571 CCER2I3L3R5 266 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 PLS1Q14651 629 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 LRRC41Q15345 812 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 PRAMEF19Q5SWL8 479 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 SLC9C2Q5TAH2 1124 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 TMEM179Q6ZVK1 233 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 AACSQ86V21 672 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 NCAPG2Q86XI2 1143 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 ERC1Q8IUD2 1116 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 FTSJ3Q8IY81 847 aaKnown RBP14.4□□□□□ -0.1
ACTN1-221ENST00000556571 FERMT2Q96AC1 680 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 SWAP70Q9UH65 585 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 NRBP1Q9UHY1 535 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 FRMPD3Q5JV73 1810 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 VCANP13611 3396 aa14.4□□□□□ -0.1
ACTN1-221ENST00000556571 TRIM43BA6NCK2 446 aa14.39□□□□□ -0.11
ACTN1-221ENST00000556571 FLOT1O75955 427 aa14.39□□□□□ -0.11
ACTN1-221ENST00000556571 FCER1AP12319 257 aa14.39□□□□□ -0.11
ACTN1-221ENST00000556571 TLE2Q04725 743 aa14.39□□□□□ -0.11
ACTN1-221ENST00000556571 SH3RF1Q7Z6J0 888 aa14.39□□□□□ -0.11
ACTN1-221ENST00000556571 TRIM43Q96BQ3 446 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-221ENST00000556571 MAML3Q96JK9 1138 aa14.39□□□□□ -0.11
ACTN1-221ENST00000556571 SH2D4AQ9H788 454 aa14.39□□□□□ -0.11
ACTN1-221ENST00000556571 PHF24Q9UPV7 400 aa14.39□□□□□ -0.11
ACTN1-221ENST00000556571 TACC3Q9Y6A5 838 aa14.39□□□□□ -0.11
ACTN1-221ENST00000556571 SLC25A27O95847 323 aa14.38□□□□□ -0.11
ACTN1-221ENST00000556571 PDE6AP16499 860 aa14.38□□□□□ -0.11
ACTN1-221ENST00000556571 FAM47AQ5JRC9 791 aa14.38□□□□□ -0.11
ACTN1-221ENST00000556571 KIAA1755Q5JYT7 1200 aa14.38□□□□□ -0.11
ACTN1-221ENST00000556571 ITPRIPQ8IWB1 547 aa14.38□□□□□ -0.11
ACTN1-221ENST00000556571 ATG4CQ96DT6 458 aa14.38□□□□□ -0.11
ACTN1-221ENST00000556571 TTYH1Q9H313 450 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-221ENST00000556571 ARHGEF10LQ9HCE6 1279 aa14.38□□□□□ -0.11
ACTN1-221ENST00000556571 DCP1AQ9NPI6 582 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-221ENST00000556571 TMX2Q9Y320 296 aa14.38□□□□□ -0.11
ACTN1-221ENST00000556571 RLFQ13129 1914 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 ZNF236Q9UL36 1845 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 TMEM265A0A087WTH1 108 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 RARBP10826 455 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 EVX2Q03828 476 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 HSP90AB4PQ58FF6 505 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 CEP85Q6P2H3 762 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 RNF180Q86T96 592 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 SPICE1Q8N0Z3 855 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 SDR42E1Q8WUS8 393 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 MYLIPQ8WY64 445 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 VCPKMTQ9H867 229 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 XPNPEP3Q9NQH7 507 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 EXOC6BQ9Y2D4 811 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 ZNF532Q9HCE3 1301 aa14.37□□□□□ -0.11
ACTN1-221ENST00000556571 WDR46O15213 610 aaKnown RBP14.36□□□□□ -0.11
ACTN1-221ENST00000556571 CLTBP09497 229 aa14.36□□□□□ -0.11
ACTN1-221ENST00000556571 CYP2D6P10635 497 aa14.36□□□□□ -0.11
ACTN1-221ENST00000556571 FOSL2P15408 326 aa14.36□□□□□ -0.11
ACTN1-221ENST00000556571 ICA1Q05084 483 aa14.36□□□□□ -0.11
ACTN1-221ENST00000556571 SLC44A5Q8NCS7 719 aa14.36□□□□□ -0.11
ACTN1-221ENST00000556571 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.36□□□□□ -0.11
ACTN1-221ENST00000556571 RNPC3Q96LT9 517 aaKnown RBP14.36□□□□□ -0.11
ACTN1-221ENST00000556571 CCDC17Q96LX7 622 aa14.36□□□□□ -0.11
ACTN1-221ENST00000556571 MMP19Q99542 508 aa14.36□□□□□ -0.11
ACTN1-221ENST00000556571 TINF2Q9BSI4 451 aa14.36□□□□□ -0.11
ACTN1-221ENST00000556571 ADAMTS5Q9UNA0 930 aa14.36□□□□□ -0.11
ACTN1-221ENST00000556571 DIS3Q9Y2L1 958 aaKnown RBP14.36□□□□□ -0.11
ACTN1-221ENST00000556571 TCRBV5S4A2TA0A5A2 114 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 KIAA0355O15063 1070 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 AKR1B1P15121 316 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms