RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 TNFAIP1Q13829 316 aa12.58□□□□□ -0.4
LINC01550-206ENST00000556462 PKN1Q16512 942 aa12.58□□□□□ -0.4
LINC01550-206ENST00000556462 FAM173BQ6P4H8 233 aa12.58□□□□□ -0.4
LINC01550-206ENST00000556462 RASGRP2Q7LDG7 609 aa12.58□□□□□ -0.4
LINC01550-206ENST00000556462 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
LINC01550-206ENST00000556462 GREB1LQ9C091 1923 aaPredicted RBP12.58□□□□□ -0.4
LINC01550-206ENST00000556462 GDF11O95390 407 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 DNM1Q05193 864 aaKnown RBP12.57□□□□□ -0.4
LINC01550-206ENST00000556462 SEPT2Q15019 361 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 GPR162Q16538 588 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 ABCB5Q2M3G0 1257 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 SLC35G1Q2M3R5 365 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 TMEM179Q6ZVK1 233 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 MKL1Q969V6 931 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
LINC01550-206ENST00000556462 KANSL2Q9H9L4 492 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 CNTNAP5Q8WYK1 1306 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 MYH8P13535 1937 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 SNHG28P0DPA3 235 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 KRT40Q6A162 431 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 MIGA2Q7L4E1 593 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 LRRC47Q8N1G4 583 aaKnown RBP12.57□□□□□ -0.4
LINC01550-206ENST00000556462 WASF1Q92558 559 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 DEFB129Q9H1M3 183 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 NYAP2Q9P242 653 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 MTMR7Q9Y216 660 aa12.57□□□□□ -0.4
LINC01550-206ENST00000556462 hCG_1642624A0A1W2PR95 340 aa12.56□□□□□ -0.4
LINC01550-206ENST00000556462 GOLGA6L22H0YM25 854 aa12.56□□□□□ -0.4
LINC01550-206ENST00000556462 CYTH3O43739 400 aa12.56□□□□□ -0.4
LINC01550-206ENST00000556462 GH2P01242 217 aa12.56□□□□□ -0.4
LINC01550-206ENST00000556462 GOLGA8HP0CJ92 632 aa12.56□□□□□ -0.4
LINC01550-206ENST00000556462 PDHBP11177 359 aa12.56□□□□□ -0.4
LINC01550-206ENST00000556462 EEF2P13639 858 aaKnown RBP12.56□□□□□ -0.4
LINC01550-206ENST00000556462 GNAQP50148 359 aa12.56□□□□□ -0.4
LINC01550-206ENST00000556462 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
LINC01550-206ENST00000556462 SHISA4Q96DD7 197 aa12.56□□□□□ -0.4
LINC01550-206ENST00000556462 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
LINC01550-206ENST00000556462 VEGFAP15692 232 aaPredicted RBP12.55□□□□□ -0.4
LINC01550-206ENST00000556462 ANGEL2Q5VTE6 544 aaKnown RBP12.55□□□□□ -0.4
LINC01550-206ENST00000556462 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
LINC01550-206ENST00000556462 CNPY2Q9Y2B0 182 aa12.55□□□□□ -0.4
LINC01550-206ENST00000556462 BAZ2BQ9UIF8 2168 aaKnown RBP12.55□□□□□ -0.4
LINC01550-206ENST00000556462 KLRF2D3W0D1 207 aa12.55□□□□□ -0.4
LINC01550-206ENST00000556462 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
LINC01550-206ENST00000556462 PARP1P09874 1014 aaKnown RBP12.55□□□□□ -0.4
LINC01550-206ENST00000556462 AKAP17AQ02040 695 aaKnown RBP12.55□□□□□ -0.4
LINC01550-206ENST00000556462 CABP5Q9NP86 173 aa12.55□□□□□ -0.4
LINC01550-206ENST00000556462 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
LINC01550-206ENST00000556462 KIF28PB7ZC32 967 aa12.54□□□□□ -0.4
LINC01550-206ENST00000556462 GRIN3BO60391 1043 aa12.54□□□□□ -0.4
LINC01550-206ENST00000556462 CAP2P40123 477 aa12.54□□□□□ -0.4
LINC01550-206ENST00000556462 ATP2B2Q01814 1243 aa12.54□□□□□ -0.4
LINC01550-206ENST00000556462 KIF23Q02241 960 aaPredicted RBP12.54□□□□□ -0.4
LINC01550-206ENST00000556462 ICA1Q05084 483 aa12.54□□□□□ -0.4
LINC01550-206ENST00000556462 LZTS2Q9BRK4 669 aa12.54□□□□□ -0.4
LINC01550-206ENST00000556462 TCHHQ07283 1943 aa12.54□□□□□ -0.4
LINC01550-206ENST00000556462 TRAK2O60296 914 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 SMARCA1P28370 1054 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 TRIM29Q14134 588 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 NBPF12Q5TAG4 269 aaPredicted RBP12.53□□□□□ -0.4
LINC01550-206ENST00000556462 DPY19L2Q6NUT2 758 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 USP48Q86UV5 1035 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 APOBEC3FQ8IUX4 373 aaKnown RBP12.53□□□□□ -0.4
LINC01550-206ENST00000556462 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 SPZ1Q9BXG8 430 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 CPVLQ9H3G5 476 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 ADARB2Q9NS39 739 aaKnown RBP12.53□□□□□ -0.4
LINC01550-206ENST00000556462 GGA3Q9NZ52 723 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 KCNJ14Q9UNX9 436 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 A0A1W2PRG0 241 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 MMP1P03956 469 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 PTMSP20962 102 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 U2AF2P26368 475 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC01550-206ENST00000556462 ZNF543Q08ER8 600 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 PFKFB3Q16875 520 aaPredicted RBP12.53□□□□□ -0.4
LINC01550-206ENST00000556462 VPS54Q9P1Q0 977 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
LINC01550-206ENST00000556462 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
LINC01550-206ENST00000556462 SCG2P13521 617 aa12.52□□□□□ -0.4
LINC01550-206ENST00000556462 NCLP19338 710 aaKnown RBP12.52□□□□□ -0.4
LINC01550-206ENST00000556462 LMOD1P29536 600 aaPredicted RBP12.52□□□□□ -0.4
LINC01550-206ENST00000556462 KRT85P78386 507 aa12.52□□□□□ -0.4
LINC01550-206ENST00000556462 ASPRV1Q53RT3 343 aa12.52□□□□□ -0.4
LINC01550-206ENST00000556462 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.4
LINC01550-206ENST00000556462 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.4
LINC01550-206ENST00000556462 UBA5Q9GZZ9 404 aa12.52□□□□□ -0.4
LINC01550-206ENST00000556462 RIOX1Q9H6W3 641 aa12.52□□□□□ -0.4
LINC01550-206ENST00000556462 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.4
LINC01550-206ENST00000556462 FRMPD2Q68DX3 1309 aaPredicted RBP12.52□□□□□ -0.41
LINC01550-206ENST00000556462 F5H6K3 240 aa12.52□□□□□ -0.41
LINC01550-206ENST00000556462 FIBPO43427 364 aa12.52□□□□□ -0.41
LINC01550-206ENST00000556462 KLRC3Q07444 240 aa12.52□□□□□ -0.41
LINC01550-206ENST00000556462 PRAMEF18Q5VWM3 479 aa12.52□□□□□ -0.41
LINC01550-206ENST00000556462 BRAPQ7Z569 592 aa12.52□□□□□ -0.41
LINC01550-206ENST00000556462 PHF20Q9BVI0 1012 aa12.52□□□□□ -0.41
LINC01550-206ENST00000556462 BTBD18B2RXH4 712 aa12.51□□□□□ -0.41
LINC01550-206ENST00000556462 XBP1P17861 261 aa12.51□□□□□ -0.41
LINC01550-206ENST00000556462 NPY5RQ15761 445 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms