RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 GJD2Q9UKL4 321 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 TAOK2Q9UL54 1235 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 TMX2Q9Y320 296 aa9.69□□□□□ -0.86
VTI1B-206ENST00000556461 MGAMO43451 1857 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 IGKV6D-41A0A0C4DH26 115 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 SPDYE16A6NNV3 312 aaPredicted RBP9.68□□□□□ -0.86
VTI1B-206ENST00000556461 ADCY3O60266 1144 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 SDSP20132 328 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 CTDSPL2Q05D32 466 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 PPARAQ07869 468 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 FAM47AQ5JRC9 791 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 GPRC5AQ8NFJ5 357 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 NACAP1Q9BZK3 213 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 NAPBQ9H115 298 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 VCPKMTQ9H867 229 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 KANSL2Q9H9L4 492 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 HELLSQ9NRZ9 838 aa9.68□□□□□ -0.86
VTI1B-206ENST00000556461 PDE4DIPQ5VU43 2346 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 GSPT1P15170 499 aaKnown RBP9.67□□□□□ -0.86
VTI1B-206ENST00000556461 TRIM32Q13049 653 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 IRF5Q13568 498 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 MCMDC2Q4G0Z9 681 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 LBX2Q6XYB7 198 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 NBPF11Q86T75 865 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 NKX2-3Q8TAU0 364 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 COA7Q96BR5 231 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 NUP88Q99567 741 aaPredicted RBP9.67□□□□□ -0.86
VTI1B-206ENST00000556461 TANGO6Q9C0B7 1094 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 IL25Q9H293 177 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 ARHGEF10LQ9HCE6 1279 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 FBXO28Q9NVF7 368 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.67□□□□□ -0.86
VTI1B-206ENST00000556461 RABGAP1Q9Y3P9 1069 aa9.67□□□□□ -0.86
VTI1B-206ENST00000556461 MYH8P13535 1937 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 GREB1LQ9C091 1923 aaPredicted RBP9.66□□□□□ -0.86
VTI1B-206ENST00000556461 FGAP02671 866 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 INHAP05111 366 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 HSPD1P10809 573 aaKnown RBP9.66□□□□□ -0.86
VTI1B-206ENST00000556461 CCL5P13501 91 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 CYP2B6P20813 491 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 ALX1Q15699 326 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 SAMD1Q6SPF0 538 aaPredicted RBP9.66□□□□□ -0.86
VTI1B-206ENST00000556461 GPR142Q7Z601 462 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 SKAP1Q86WV1 359 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 ZNF444Q8N0Y2 327 aaPredicted RBP9.66□□□□□ -0.86
VTI1B-206ENST00000556461 SLAIN1Q8ND83 568 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 LPAR1Q92633 364 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 USP6NLQ92738 828 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 SHISA4Q96DD7 197 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 ATG4CQ96DT6 458 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 CEP95Q96GE4 821 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 MTMR4Q9NYA4 1195 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 CLIP2Q9UDT6 1046 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 RLFQ13129 1914 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 PLXNB2O15031 1838 aa9.66□□□□□ -0.86
VTI1B-206ENST00000556461 CCDC171Q6TFL3 1326 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 WDR46O15213 610 aaKnown RBP9.65□□□□□ -0.86
VTI1B-206ENST00000556461 RAD21O60216 631 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 NMT2O60551 498 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 FLOT1O75955 427 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 NDUFB10O96000 172 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 DSG3P32926 999 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 HAND2P61296 217 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 TFAP4Q01664 338 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 COG2Q14746 738 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 MORN1Q5T089 497 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 FAM83BQ5T0W9 1011 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 CWC27Q6UX04 472 aaKnown RBP9.65□□□□□ -0.86
VTI1B-206ENST00000556461 PLEKHH3Q7Z736 793 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 LRRC47Q8N1G4 583 aaKnown RBP9.65□□□□□ -0.86
VTI1B-206ENST00000556461 NEDD1Q8NHV4 660 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 GTF3C2Q8WUA4 911 aaPredicted RBP9.65□□□□□ -0.86
VTI1B-206ENST00000556461 TRIB2Q92519 343 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 CHMP4CQ96CF2 233 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 NBPF3Q9H094 633 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 SH2D4AQ9H788 454 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 NYAP2Q9P242 653 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 BIN2Q9UBW5 565 aaPredicted RBP9.65□□□□□ -0.86
VTI1B-206ENST00000556461 ANAPC4Q9UJX5 808 aa9.65□□□□□ -0.86
VTI1B-206ENST00000556461 PLIN4Q96Q06 1357 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 F5H6K3 240 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 TSPY3P0CV98 308 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 TSPY8P0CW00 308 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 MAPK4P31152 587 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 PDE4BQ07343 736 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 KLRC3Q07444 240 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 TMEM132BQ14DG7 1078 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 CCL14Q16627 93 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 TTC22Q5TAA0 569 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 WDR78Q5VTH9 848 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 RASGRP2Q7LDG7 609 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 TICAM2Q86XR7 235 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 MKL1Q969V6 931 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 MOV10L1Q9BXT6 1211 aaKnown RBP9.64□□□□□ -0.87
VTI1B-206ENST00000556461 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
VTI1B-206ENST00000556461 RNF208Q9H0X6 261 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms