RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 KIF23Q02241 960 aaPredicted RBP5.79□□□□□ -1.48
TMEM260-210ENST00000556422 CCDC15Q0P6D6 951 aa5.79□□□□□ -1.48
TMEM260-210ENST00000556422 TRIM29Q14134 588 aa5.79□□□□□ -1.48
TMEM260-210ENST00000556422 MAP3K11Q16584 847 aa5.79□□□□□ -1.48
TMEM260-210ENST00000556422 PHKBQ93100 1093 aa5.79□□□□□ -1.48
TMEM260-210ENST00000556422 C8orf76Q96K31 380 aa5.79□□□□□ -1.48
TMEM260-210ENST00000556422 NYXQ9GZU5 481 aa5.79□□□□□ -1.48
TMEM260-210ENST00000556422 DDX19AQ9NUU7 478 aaKnown RBP5.79□□□□□ -1.48
TMEM260-210ENST00000556422 RTCBQ9Y3I0 505 aaKnown RBP5.79□□□□□ -1.48
TMEM260-210ENST00000556422 GNAT2P19087 354 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CYP7A1P22680 504 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 USP5P45974 858 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CD151P48509 253 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 TYRO3Q06418 890 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CCDC92Q53HC0 331 aaPredicted RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 NOM1Q5C9Z4 860 aaKnown RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 ATL3Q6DD88 541 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 DZIP1Q86YF9 867 aaKnown RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CCDC144CPQ8IYA2 1237 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 LINC00301Q8NCQ3 95 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 NSUN4Q96CB9 384 aaKnown RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CLIC4Q9Y696 253 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 NAV1Q8NEY1 1877 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 AFF2P51816 1311 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 PDS5AQ29RF7 1337 aaKnown RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CCDC196A0A1B0GTZ2 297 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 ZPR1O75312 459 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 PPFIA2O75334 1257 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 POLR3DP05423 398 aaPredicted RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 ATICP31939 592 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 RDXP35241 583 aaKnown RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 DYNLL1P63167 89 aaKnown RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 PPARAQ07869 468 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 BMS1Q14692 1282 aaKnown RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 SART3Q15020 963 aaKnown RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 MYSM1Q5VVJ2 828 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 MYLK4Q86YV6 388 aaPredicted RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 VPS37AQ8NEZ2 397 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 BICD2Q8TD16 824 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 NLRP3Q96P20 1036 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 ZKSCAN3Q9BRR0 538 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 TNMDQ9H2S6 317 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 POLR3EQ9NVU0 708 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 RTEL1Q9NZ71 1219 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 PCDHA7Q9UN72 937 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 JRKLQ9Y4A0 524 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 FOCADQ5VW36 1801 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CPLX1O14810 134 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 ZBTB43O43298 467 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CCDC192P0DO97 292 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 PRDX5P30044 214 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 GABPB1Q06547 395 aaPredicted RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 MCM6Q14566 821 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 NFIXQ14938 502 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 TMEM67Q5HYA8 995 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 MFSD6Q6ZSS7 791 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 PAF1Q8N7H5 531 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CNNM2Q9H8M5 875 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 RGS17Q9UGC6 210 aaPredicted RBP5.78□□□□□ -1.48
TMEM260-210ENST00000556422 KLF15Q9UIH9 416 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 ZKSCAN5Q9Y2L8 839 aa5.78□□□□□ -1.48
TMEM260-210ENST00000556422 CYP2D7A0A087X1C5 515 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 GOLGA6L4A6NEF3 574 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 KINO60870 393 aaKnown RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 EIF3JO75822 258 aaKnown RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 NEBLO76041 1014 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 ADCY5O95622 1261 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 SKILP12757 684 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 GUCY1A2P33402 732 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 SESN3P58005 492 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 PRPF4BQ13523 1007 aaKnown RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 SEC23AQ15436 765 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 CAVIN4Q5BKX8 364 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 TPTE2Q6XPS3 522 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 FAM196AQ6ZSG2 479 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 IQCF2Q8IXL9 164 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 FAM200AQ8TCP9 573 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 C17orf50Q8WW18 174 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 TFCP2L1Q9NZI6 479 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 V9GYY5 206 aaPredicted RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 MROH7-TTC4A0A0A0MT08 1334 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 MAGEB6P1A0A0J9YX57 407 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 IFIT3O14879 490 aaKnown RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 FGRP09769 529 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 PEX19P40855 299 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 MCCD1P59942 119 aaPredicted RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 IFT88Q13099 833 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 ANO6Q4KMQ2 910 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 HSP90B2PQ58FF3 399 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 LUZP1Q86V48 1076 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 VPS37DQ86XT2 251 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 CCAR1Q8IX12 1150 aaKnown RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 FMR1NBQ8N0W7 255 aaPredicted RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 SHISA4Q96DD7 197 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 MPP4Q96JB8 637 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 PAGR1Q9BTK6 254 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 KRT23Q9C075 422 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 STK36Q9NRP7 1315 aa5.77□□□□□ -1.49
TMEM260-210ENST00000556422 ZC3H4Q9UPT8 1303 aaKnown RBP5.77□□□□□ -1.49
TMEM260-210ENST00000556422 NRXN2Q9P2S2 1712 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms