RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 TYW1BQ6NUM6 668 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 FOXP4Q8IVH2 680 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-216ENST00000556066 PROCA1Q8NCQ7 364 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-216ENST00000556066 RHPN1Q8TCX5 695 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 ANTXR1Q9H6X2 564 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 NAV1Q8NEY1 1877 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 ADCY3O60266 1144 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 HMMRO75330 724 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 IFIT2P09913 472 aaKnown RBP8.13□□□□□ -1.11
PSEN1-216ENST00000556066 ELNP15502 786 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 IRX3P78415 501 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-216ENST00000556066 JAG1P78504 1218 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 PABPC4Q13310 644 aaKnown RBP eCLIP8.13□□□□□ -1.11
PSEN1-216ENST00000556066 CLASRPQ8N2M8 674 aaKnown RBP8.13□□□□□ -1.11
PSEN1-216ENST00000556066 ANKK1Q8NFD2 765 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 COA7Q96BR5 231 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 DNAJC2Q99543 621 aaKnown RBP8.13□□□□□ -1.11
PSEN1-216ENST00000556066 ZBED2Q9BTP6 218 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 TBC1D2Q9BYX2 928 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 RNF208Q9H0X6 261 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 ASCC2Q9H1I8 757 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-216ENST00000556066 DNAJC18Q9H819 358 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 SLC24A3Q9HC58 644 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 TMOD4Q9NZQ9 345 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 RCAN3Q9UKA8 241 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 DDX19BQ9UMR2 479 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 MYH7P12883 1935 aa8.13□□□□□ -1.11
PSEN1-216ENST00000556066 LAMA3Q16787 3333 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 BAZ2AQ9UIF9 1905 aaKnown RBP8.12□□□□□ -1.11
PSEN1-216ENST00000556066 GOLIM4O00461 696 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 GCLCP48506 637 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-216ENST00000556066 BACE1P56817 501 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 LAPTM4AQ15012 233 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 TTF1Q15361 905 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-216ENST00000556066 FAM110CQ1W6H9 321 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 CERS3Q8IU89 383 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 RPAP2Q8IXW5 612 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-216ENST00000556066 KIF1BPQ96EK5 621 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 WDR18Q9BV38 432 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 ZBTB40Q9NUA8 1239 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 ZBTB21Q9ULJ3 1066 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 COL6A3P12111 3177 aa8.12□□□□□ -1.11
PSEN1-216ENST00000556066 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 C19orf81C9J6K1 198 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 USP17L10C9JJH3 530 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 IGSF3O75054 1194 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 GH2P01242 217 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 INHAP05111 366 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-216ENST00000556066 GJB1P08034 283 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 PTGDRQ13258 359 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 RAB3GAP1Q15042 981 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 ZYXQ15942 572 aaKnown RBP8.11□□□□□ -1.11
PSEN1-216ENST00000556066 SH3D19Q5HYK7 790 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 SLC9C2Q5TAH2 1124 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 NYAP1Q6ZVC0 841 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 TTC6Q86TZ1 520 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 METTL16Q86W50 562 aaKnown RBP8.11□□□□□ -1.11
PSEN1-216ENST00000556066 CCAR1Q8IX12 1150 aaKnown RBP8.11□□□□□ -1.11
PSEN1-216ENST00000556066 SIRT2Q8IXJ6 389 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 NKX2-3Q8TAU0 364 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 U2AF1L4Q8WU68 220 aaKnown RBP8.11□□□□□ -1.11
PSEN1-216ENST00000556066 ZDHHC16Q969W1 377 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 SHISA4Q96DD7 197 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 FEZ1Q99689 392 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 UNC93B1Q9H1C4 597 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 CHMP4BQ9H444 224 aaKnown RBP8.11□□□□□ -1.11
PSEN1-216ENST00000556066 RBM27Q9P2N5 1060 aaKnown RBP8.11□□□□□ -1.11
PSEN1-216ENST00000556066 SERPINB13Q9UIV8 391 aa8.11□□□□□ -1.11
PSEN1-216ENST00000556066 PLXNB2O15031 1838 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 TTC28Q96AY4 2481 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 ZNF532Q9HCE3 1301 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 MAP3K7O43318 606 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 PEX10O60683 326 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 RAB11FIP3O75154 756 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 TFRCP02786 760 aaKnown RBP8.1□□□□□ -1.11
PSEN1-216ENST00000556066 PDE6AP16499 860 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 GJA8P48165 433 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 PLCD1P51178 756 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 IRF5Q13568 498 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 HIC1Q14526 733 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 CERKLQ49MI3 558 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-216ENST00000556066 C20orf194Q5TEA3 1177 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 PXYLP1Q8TE99 480 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 DPF3Q92784 378 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 EDC3Q96F86 508 aaKnown RBP8.1□□□□□ -1.11
PSEN1-216ENST00000556066 DEFB118Q96PH6 123 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 P2RX7Q99572 595 aaKnown RBP8.1□□□□□ -1.11
PSEN1-216ENST00000556066 RIOK1Q9BRS2 568 aaKnown RBP8.1□□□□□ -1.11
PSEN1-216ENST00000556066 PAGR1Q9BTK6 254 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 CRNKL1Q9BZJ0 848 aaKnown RBP8.1□□□□□ -1.11
PSEN1-216ENST00000556066 PRO3102Q9H379 93 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 BOLA2Q9H3K6 86 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 NPDC1Q9NQX5 325 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-216ENST00000556066 GINM1Q9NU53 330 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 MCM9Q9NXL9 1143 aa8.1□□□□□ -1.11
PSEN1-216ENST00000556066 DDX60LQ5H9U9 1706 aaKnown RBP8.09□□□□□ -1.11
PSEN1-216ENST00000556066 DLL1O00548 723 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 MPHOSPH10O00566 681 aaKnown RBP8.09□□□□□ -1.11
PSEN1-216ENST00000556066 FARP2O94887 1054 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms