RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 SHC4Q6S5L8 630 aa11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 STAG2Q8N3U4 1231 aa11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 OSBPL5Q9H0X9 879 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 DNAJC25Q9H1X3 360 aa11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 CBX8Q9HC52 389 aa11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 KCNQ5Q9NR82 932 aa11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 PCDHB6Q9Y5E3 794 aa11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 MORC2Q9Y6X9 1032 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 QSER1Q2KHR3 1735 aa11.59□□□□□ -0.55
EFCAB11-209ENST00000556005 MYH6P13533 1939 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 PALM3A6NDB9 673 aaPredicted RBP11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 TRIM75PA6NK02 468 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 PTPREP23469 700 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 NOVP48745 357 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 KIAA2012Q0VF49 1180 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 LUZP1Q86V48 1076 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 KIAA0825Q8IV33 1275 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 FAM177A1Q8N128 213 aaPredicted RBP11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 CEP95Q96GE4 821 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 CLIC6Q96NY7 704 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 DDX4Q9NQI0 724 aaKnown RBP11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 FAM13BQ9NYF5 915 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 KIAA1468Q9P260 1216 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 DDX60LQ5H9U9 1706 aaKnown RBP11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 SNED1Q8TER0 1413 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 MYO3BQ8WXR4 1341 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 MYH1P12882 1939 aa11.58□□□□□ -0.56
EFCAB11-209ENST00000556005 PTMAP06454 111 aaKnown RBP11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 PARP1P09874 1014 aaKnown RBP11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 ATP2B1P20020 1258 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 SMARCA1P28370 1054 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 NPY5RQ15761 445 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 AOC3Q16853 763 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 ZSCAN30Q86W11 494 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 SLC16A10Q8TF71 515 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 PIBF1Q8WXW3 757 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 NAT10Q9H0A0 1025 aaKnown RBP11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 SRPRBQ9Y5M8 271 aaKnown RBP11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 SLX4Q8IY92 1834 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 KLRF2D3W0D1 207 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 MSNP26038 577 aaKnown RBP11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 TRAPPC10P48553 1259 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 RBM5P52756 815 aaKnown RBP eCLIP11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 GALNT17Q6IS24 598 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 RTKN2Q8IZC4 609 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 TTLL6Q8N841 843 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 CCDC148Q8NFR7 591 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 TNFRSF25Q93038 417 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 DHX36Q9H2U1 1008 aaKnown RBP11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 RRAGDQ9NQL2 400 aaPredicted RBP11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 FBXO2Q9UK22 296 aaPredicted RBP11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 KCNH3Q9ULD8 1083 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 MTMR7Q9Y216 660 aa11.57□□□□□ -0.56
EFCAB11-209ENST00000556005 PLIN4Q96Q06 1357 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 GOLGA6L19H0YKK7 550 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 C21orf2O43822 256 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 DEFB132Q7Z7B7 95 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 ELOA2Q8IYF1 753 aaPredicted RBP11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 CEP57L1Q8IYX8 460 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 SPZ1Q9BXG8 430 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 EHD4Q9H223 541 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 MTMR4Q9NYA4 1195 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 HOOK1Q9UJC3 728 aaKnown RBP11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 PCDHA4Q9UN74 947 aa11.56□□□□□ -0.56
EFCAB11-209ENST00000556005 BECN2A8MW95 431 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 PPIP5K2O43314 1243 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 CYTH3O43739 400 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 GOLGA8HP0CJ92 632 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 CCDC93Q567U6 631 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 EARS2Q5JPH6 523 aaKnown RBP11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 BLIDQ8IZY5 108 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 FBXO41Q8TF61 875 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 CCDC12Q8WUD4 166 aaPredicted RBP11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 FERMT2Q96AC1 680 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 BARHL2Q9NY43 387 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 TTLL1O95922 423 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 AKR1B1P15121 316 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 VEGFAP15692 232 aaPredicted RBP11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 CLCN1P35523 988 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 NFIAQ12857 509 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 TTC38Q5R3I4 469 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 USP17L2Q6R6M4 530 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 PIK3AP1Q6ZUJ8 805 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 CNNM3Q8NE01 707 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 ERCC4Q92889 916 aaPredicted RBP11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 GPKOWQ92917 476 aaPredicted RBP eCLIP11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 RRP36Q96EU6 259 aaKnown RBP11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 CCDC17Q96LX7 622 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 PDGFDQ9GZP0 370 aaPredicted RBP11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 PI4KBQ9UBF8 816 aa11.55□□□□□ -0.56
EFCAB11-209ENST00000556005 C10orf71Q711Q0 1435 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms