RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ZNF496Q96IT1 587 aaPredicted RBP8.75□□□□□ -1.01
CHD8-209ENST00000555935 DNAJC7Q99615 494 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 RNF216Q9NWF9 866 aaPredicted RBP8.75□□□□□ -1.01
CHD8-209ENST00000555935 CWC25Q9NXE8 425 aaPredicted RBP8.75□□□□□ -1.01
CHD8-209ENST00000555935 RWDD2AQ9UIY3 292 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 PCDHB6Q9Y5E3 794 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 SLC12A7Q9Y666 1083 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 ARFGEF2Q9Y6D5 1785 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 ZEB2O60315 1214 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 KIAA0754O94854 1291 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 FSBPO95073 299 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 DEXIO95424 95 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 CCT6AP40227 531 aaKnown RBP8.74□□□□□ -1.01
CHD8-209ENST00000555935 TSR1Q2NL82 804 aaKnown RBP8.74□□□□□ -1.01
CHD8-209ENST00000555935 CCDC122Q5T0U0 273 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 ALS2CLQ60I27 953 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 MICALCLQ6ZW33 695 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 TTC5Q8N0Z6 440 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 FNBP4Q8N3X1 1017 aaPredicted RBP8.74□□□□□ -1.01
CHD8-209ENST00000555935 MMGT1Q8N4V1 131 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 FERMT2Q96AC1 680 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 PAGR1Q9BTK6 254 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 HDAC6Q9UBN7 1215 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 CTNND2Q9UQB3 1225 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 A0A1W2PQC6 194 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 B4E1Z4 1266 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
CHD8-209ENST00000555935 TCP11X2Q5H9J9 407 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 FBXW10Q5XX13 1052 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 USP49Q70CQ1 688 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 ZNF572Q7Z3I7 529 aaPredicted RBP8.74□□□□□ -1.01
CHD8-209ENST00000555935 YTHDF3Q7Z739 585 aaKnown RBP8.74□□□□□ -1.01
CHD8-209ENST00000555935 ANKRD18AQ8IVF6 992 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 XAGE2Q96GT9 111 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 PYM1Q9BRP8 204 aaKnown RBP8.74□□□□□ -1.01
CHD8-209ENST00000555935 ECM29Q5VYK3 1845 aa8.74□□□□□ -1.01
CHD8-209ENST00000555935 TRIM75PA6NK02 468 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 KCNJ18B7U540 433 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 RNF225M0QZC1 329 aaPredicted RBP8.73□□□□□ -1.01
CHD8-209ENST00000555935 ENC1O14682 589 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 CLSTN1O94985 981 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 ZAP70P43403 619 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 AFMP43652 599 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 RCAN1P53805 252 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 HERVK_113P62684 666 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 PAK1Q13153 545 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 KCNJ12Q14500 433 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 EMBQ6PCB8 327 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 SECISBP2LQ93073 1101 aaKnown RBP8.73□□□□□ -1.01
CHD8-209ENST00000555935 CHP1Q99653 195 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 SENP2Q9HC62 589 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 TRIM10Q9UDY6 481 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 TAOK2Q9UL54 1235 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 LUC7L2Q9Y383 392 aaKnown RBP8.73□□□□□ -1.01
CHD8-209ENST00000555935 PARP4Q9UKK3 1724 aaKnown RBP8.73□□□□□ -1.01
CHD8-209ENST00000555935 IPO7O95373 1038 aaKnown RBP8.73□□□□□ -1.01
CHD8-209ENST00000555935 MYBL2P10244 700 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 CDC25AP30304 524 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 ADD2P35612 726 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 CYLC1P35663 651 aaPredicted RBP8.73□□□□□ -1.01
CHD8-209ENST00000555935 EPHB4P54760 987 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 APBA1Q02410 837 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 UBE3CQ15386 1083 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 ALX1Q15699 326 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 SKIDA1Q1XH10 827 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 KIAA1328Q86T90 577 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 OTUD6BQ8N6M0 293 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 CAPZA3Q96KX2 299 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 RUFY1Q96T51 708 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 VPS16Q9H269 839 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 CNNM2Q9H8M5 875 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 TAB2Q9NYJ8 693 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 DENND2AQ9ULE3 1009 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 KCNJ14Q9UNX9 436 aa8.73□□□□□ -1.01
CHD8-209ENST00000555935 A0A087X0B3 334 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 H0YHG0 523 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 NDUFAB1O14561 156 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 IFIT3O14879 490 aaKnown RBP8.72□□□□□ -1.01
CHD8-209ENST00000555935 MEFVO15553 781 aaPredicted RBP8.72□□□□□ -1.01
CHD8-209ENST00000555935 C21orf2O43822 256 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 SRGAP2O75044 1071 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 ADORA1P30542 326 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 FNTAP49354 379 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 UBXN1Q04323 297 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 NNTQ13423 1086 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 PLCB4Q15147 1175 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 MEA1Q16626 185 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 RTN1Q16799 776 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 SND1Q7KZF4 910 aaKnown RBP eCLIP8.72□□□□□ -1.01
CHD8-209ENST00000555935 GSPT2Q8IYD1 628 aaKnown RBP8.72□□□□□ -1.01
CHD8-209ENST00000555935 SMYD4Q8IYR2 804 aaPredicted RBP8.72□□□□□ -1.01
CHD8-209ENST00000555935 CCDC170Q8IYT3 715 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 SYMPKQ92797 1274 aaKnown RBP8.72□□□□□ -1.01
CHD8-209ENST00000555935 ZNF594Q96JF6 807 aaPredicted RBP8.72□□□□□ -1.01
CHD8-209ENST00000555935 GDAP1L1Q96MZ0 367 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 PURBQ96QR8 312 aaKnown RBP8.72□□□□□ -1.01
CHD8-209ENST00000555935 MTA3Q9BTC8 594 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 TSGA10Q9BZW7 698 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 RMND1Q9NWS8 449 aa8.72□□□□□ -1.01
CHD8-209ENST00000555935 CAPN11Q9UMQ6 739 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms