RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.32	□□□□□ -0.28
RAD51B-222	ENST00000555907	CPA4	Q9UI42	421 aa		13.32	□□□□□ -0.28
RAD51B-222	ENST00000555907	BRCA2	P51587	3418 aa		13.32	□□□□□ -0.28
RAD51B-222	ENST00000555907	NEDD4	P46934	1319 aa		13.32	□□□□□ -0.28
RAD51B-222	ENST00000555907		B4E1Z4	1266 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	BTBD19	C9JJ37	291 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	KDM4A	O75164	1064 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	RASA1	P20936	1047 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	ANTXR2	P58335	489 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	LACTB	P83111	547 aa	Predicted RBP	13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	SNAPC2	Q13487	334 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	ANKRD1	Q15327	319 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	TMTC2	Q8N394	836 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	NEDD1	Q8NHV4	660 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	ANKS1A	Q92625	1134 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	TMEM87B	Q96K49	555 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	DNAJC18	Q9H819	358 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	GINM1	Q9NU53	330 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	PDRG1	Q9NUG6	133 aa		13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	BIN2	Q9UBW5	565 aa	Predicted RBP	13.31	□□□□□ -0.28
RAD51B-222	ENST00000555907	CEP290	O15078	2479 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	DOCK1	Q14185	1865 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	PHF20L1	A8MW92	1017 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	ST18	O60284	1047 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	NOV	P48745	357 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	EVC	P57679	992 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	TFAP4	Q01664	338 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	COL9A3	Q14050	684 aa	Predicted RBP	13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	NOL9	Q5SY16	702 aa	Known RBP	13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	CYB5R4	Q7L1T6	521 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	SLC44A5	Q8NCS7	719 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	SLC17A8	Q8NDX2	589 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	NKX2-3	Q8TAU0	364 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	IGDCC4	Q8TDY8	1250 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	SHISA4	Q96DD7	197 aa		13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	UPF3B	Q9BZI7	483 aa	Known RBP	13.3	□□□□□ -0.28
RAD51B-222	ENST00000555907	DLL1	O00548	723 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	PRC1	O43663	620 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	RANBP6	O60518	1105 aa	Known RBP	13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	TLR2	O60603	784 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	PRDM1	O75626	825 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	SLURP2	P0DP57	97 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	LIFR	P42702	1097 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	PSMC4	P43686	418 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	CERKL	Q49MI3	558 aa	Predicted RBP	13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	RRP12	Q5JTH9	1297 aa	Known RBP	13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	IQCA1	Q86XH1	822 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	DGKH	Q86XP1	1220 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	RAET1E	Q8TD07	263 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	TRIM34	Q9BYJ4	488 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	SIPA1L1	O43166	1804 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	PHIP	Q8WWQ0	1821 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	ATAD5	Q96QE3	1844 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	PLIN4	Q96Q06	1357 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	PTPRF	P10586	1907 aa		13.29	□□□□□ -0.28
RAD51B-222	ENST00000555907	IGKV6D-41	A0A0C4DH26	115 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	FMNL1	O95466	1100 aa	Predicted RBP	13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	CPA1	P15085	419 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	CTGF	P29279	349 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	SART3	Q15020	963 aa	Known RBP	13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	SEC23A	Q15436	765 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	PPP4R3B	Q5MIZ7	849 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907		Q6ZUG5	572 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	SGMS1	Q86VZ5	419 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	SCYL3	Q8IZE3	742 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	STK11IP	Q8N1F8	1099 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	ZCCHC17	Q9NP64	241 aa	Known RBP	13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	PICK1	Q9NRD5	415 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	TOMM22	Q9NS69	142 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	KCNH4	Q9UQ05	1017 aa		13.28	□□□□□ -0.28
RAD51B-222	ENST00000555907	TSPY2	A6NKD2	308 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	SH2B2	O14492	632 aa	Predicted RBP	13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	TSPY3	P0CV98	308 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	TSPY8	P0CW00	308 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	CAP2	P40123	477 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	AK2	P54819	239 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	TOB2	Q14106	344 aa	Predicted RBP	13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	FAM47A	Q5JRC9	791 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	RNF208	Q9H0X6	261 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	IL17RB	Q9NRM6	502 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	LIMCH1	Q9UPQ0	1083 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	ZHX2	Q9Y6X8	837 aa		13.27	□□□□□ -0.29
RAD51B-222	ENST00000555907	ERICH2	A1L162	156 aa		13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	FAM196B	A6NMK8	535 aa		13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	CXCL11	O14625	94 aa		13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	IFIT3	O14879	490 aa	Known RBP	13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	CTNND1	O60716	968 aa	Known RBP	13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	CCL5	P13501	91 aa		13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	AKR1B1	P15121	316 aa		13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	PTPRA	P18433	802 aa		13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	OSBP	P22059	807 aa		13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	GRK4	P32298	578 aa		13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	ANP32A	P39687	249 aa	Known RBP	13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	RRP1B	Q14684	758 aa	Known RBP	13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	TMEM67	Q5HYA8	995 aa		13.26	□□□□□ -0.29
RAD51B-222	ENST00000555907	RCSD1	Q6JBY9	416 aa		13.26	□□□□□ -0.29

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