RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 COL11A1P12107 1806 aaPredicted RBP23.76■■□□□ 1.39
PRKCH-219ENST00000555906 SLC15A5A6NIM6 579 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 PTPREP23469 700 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 GRB14Q14449 540 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 C12orf60Q5U649 245 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 LPAR1Q92633 364 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 DYNLL2Q96FJ2 89 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 DDRGK1Q96HY6 314 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 C11orf49Q9H6J7 331 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 SH2D4AQ9H788 454 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 ARHGEF10LQ9HCE6 1279 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 IVNS1ABPQ9Y6Y0 642 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 LAMA3Q16787 3333 aa23.76■■□□□ 1.39
PRKCH-219ENST00000555906 SMARCA5O60264 1052 aaPredicted RBP23.75■■□□□ 1.39
PRKCH-219ENST00000555906 CHGBP05060 677 aa23.75■■□□□ 1.39
PRKCH-219ENST00000555906 AKR1B1P15121 316 aa23.75■■□□□ 1.39
PRKCH-219ENST00000555906 ICA1Q05084 483 aa23.75■■□□□ 1.39
PRKCH-219ENST00000555906 WDR78Q5VTH9 848 aa23.75■■□□□ 1.39
PRKCH-219ENST00000555906 C16orf86Q6ZW13 317 aa23.75■■□□□ 1.39
PRKCH-219ENST00000555906 CCDC17Q96LX7 622 aa23.75■■□□□ 1.39
PRKCH-219ENST00000555906 TANGO6Q9C0B7 1094 aa23.75■■□□□ 1.39
PRKCH-219ENST00000555906 A0A1W2PPC1 479 aa23.74■■□□□ 1.39
PRKCH-219ENST00000555906 HOXC6P09630 235 aa23.74■■□□□ 1.39
PRKCH-219ENST00000555906 CCND3P30281 292 aaPredicted RBP23.74■■□□□ 1.39
PRKCH-219ENST00000555906 COG2Q14746 738 aa23.74■■□□□ 1.39
PRKCH-219ENST00000555906 ECHDC1Q9NTX5 307 aa23.74■■□□□ 1.39
PRKCH-219ENST00000555906 SLC4A4Q9Y6R1 1079 aa23.74■■□□□ 1.39
PRKCH-219ENST00000555906 CLEC10AQ8IUN9 316 aa23.73■■□□□ 1.39
PRKCH-219ENST00000555906 MB21D1Q8N884 522 aa23.73■■□□□ 1.39
PRKCH-219ENST00000555906 HOXC10Q9NYD6 342 aa23.73■■□□□ 1.39
PRKCH-219ENST00000555906 TMX2Q9Y320 296 aa23.73■■□□□ 1.39
PRKCH-219ENST00000555906 CYP2D7A0A087X1C5 515 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 USP17L12C9JPN9 530 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 USP17L21D6R901 530 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 CDK8P49336 464 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 KIAA1755Q5JYT7 1200 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 MFSD14CQ5VZR4 134 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 LHX8Q68G74 356 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 C7orf61Q8IZ16 206 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 SHCBP1Q8NEM2 672 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 GPATCH3Q96I76 525 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 PUS7LQ9H0K6 701 aaKnown RBP23.72■■□□□ 1.39
PRKCH-219ENST00000555906 VCPKMTQ9H867 229 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 FLRT1Q9NZU1 646 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 ARPP21Q9UBL0 812 aaPredicted RBP23.72■■□□□ 1.39
PRKCH-219ENST00000555906 PFASO15067 1338 aa23.72■■□□□ 1.39
PRKCH-219ENST00000555906 SIAH1Q8IUQ4 282 aa23.71■■□□□ 1.39
PRKCH-219ENST00000555906 MOV10L1Q9BXT6 1211 aaKnown RBP23.71■■□□□ 1.39
PRKCH-219ENST00000555906 SPATC1LQ9H0A9 340 aa23.71■■□□□ 1.39
PRKCH-219ENST00000555906 DCTPP1Q9H773 170 aa23.71■■□□□ 1.39
PRKCH-219ENST00000555906 ROBO3Q96MS0 1386 aa23.7■■□□□ 1.38
PRKCH-219ENST00000555906 SMIM22K7EJ46 135 aa23.7■■□□□ 1.38
PRKCH-219ENST00000555906 WDR46O15213 610 aaKnown RBP23.7■■□□□ 1.38
PRKCH-219ENST00000555906 COL6A1P12109 1028 aa23.7■■□□□ 1.38
PRKCH-219ENST00000555906 CTR9Q6PD62 1173 aa23.7■■□□□ 1.38
PRKCH-219ENST00000555906 KBTBD3Q8NAB2 608 aa23.7■■□□□ 1.38
PRKCH-219ENST00000555906 FLOT1O75955 427 aa23.69■■□□□ 1.38
PRKCH-219ENST00000555906 DSG3P32926 999 aa23.69■■□□□ 1.38
PRKCH-219ENST00000555906 NPLOC4Q8TAT6 608 aa23.69■■□□□ 1.38
PRKCH-219ENST00000555906 MYH4Q9Y623 1939 aa23.69■■□□□ 1.38
PRKCH-219ENST00000555906 STRNO43815 780 aa23.68■■□□□ 1.38
PRKCH-219ENST00000555906 MSCO60682 206 aa23.68■■□□□ 1.38
PRKCH-219ENST00000555906 IGHA2P01877 340 aa23.68■■□□□ 1.38
PRKCH-219ENST00000555906 ADORA2AP29274 412 aa23.68■■□□□ 1.38
PRKCH-219ENST00000555906 ATP2B2Q01814 1243 aa23.68■■□□□ 1.38
PRKCH-219ENST00000555906 SPICE1Q8N0Z3 855 aa23.68■■□□□ 1.38
PRKCH-219ENST00000555906 STRBPQ96SI9 672 aaKnown RBP23.68■■□□□ 1.38
PRKCH-219ENST00000555906 KANSL2Q9H9L4 492 aa23.68■■□□□ 1.38
PRKCH-219ENST00000555906 ZNFX1Q9P2E3 1918 aaKnown RBP23.68■■□□□ 1.38
PRKCH-219ENST00000555906 PLXNA1Q9UIW2 1896 aa23.68■■□□□ 1.38
PRKCH-219ENST00000555906 ERCC3P19447 782 aa23.67■■□□□ 1.38
PRKCH-219ENST00000555906 SBK1Q52WX2 424 aa23.67■■□□□ 1.38
PRKCH-219ENST00000555906 OLFML2BQ68BL8 750 aa23.67■■□□□ 1.38
PRKCH-219ENST00000555906 GIMAP6Q6P9H5 292 aa23.67■■□□□ 1.38
PRKCH-219ENST00000555906 APPBP2Q92624 585 aa23.67■■□□□ 1.38
PRKCH-219ENST00000555906 ATG4CQ96DT6 458 aa23.67■■□□□ 1.38
PRKCH-219ENST00000555906 MROH8Q9H579 483 aa23.67■■□□□ 1.38
PRKCH-219ENST00000555906 DDX20Q9UHI6 824 aaKnown RBP23.67■■□□□ 1.38
PRKCH-219ENST00000555906 DNAH12Q6ZR08 3092 aa23.67■■□□□ 1.38
PRKCH-219ENST00000555906 EEF2P13639 858 aaKnown RBP23.66■■□□□ 1.38
PRKCH-219ENST00000555906 ABRAQ8N0Z2 381 aa23.66■■□□□ 1.38
PRKCH-219ENST00000555906 GDF15Q99988 308 aa23.66■■□□□ 1.38
PRKCH-219ENST00000555906 STAP2Q9UGK3 403 aa23.66■■□□□ 1.38
PRKCH-219ENST00000555906 ZMYND8Q9ULU4 1186 aaPredicted RBP23.66■■□□□ 1.38
PRKCH-219ENST00000555906 ZFYP08048 801 aaPredicted RBP23.65■■□□□ 1.38
PRKCH-219ENST00000555906 CYBAP13498 195 aa23.65■■□□□ 1.38
PRKCH-219ENST00000555906 BMP8BP34820 402 aa23.65■■□□□ 1.38
PRKCH-219ENST00000555906 TSHZ3Q63HK5 1081 aa23.65■■□□□ 1.38
PRKCH-219ENST00000555906 DPP9Q86TI2 863 aa23.65■■□□□ 1.38
PRKCH-219ENST00000555906 GOPCQ9HD26 462 aa23.65■■□□□ 1.38
PRKCH-219ENST00000555906 GSG1L2A8MUP6 293 aa23.64■■□□□ 1.37
PRKCH-219ENST00000555906 CYP2C19P33261 490 aa23.64■■□□□ 1.37
PRKCH-219ENST00000555906 PLS1Q14651 629 aa23.64■■□□□ 1.37
PRKCH-219ENST00000555906 OSBP2Q969R2 916 aa23.64■■□□□ 1.37
PRKCH-219ENST00000555906 SLC5A4Q9NY91 659 aa23.64■■□□□ 1.37
PRKCH-219ENST00000555906 TTC41PQ6P2S7 1318 aa23.63■■□□□ 1.37
PRKCH-219ENST00000555906 RNF113AO15541 343 aaKnown RBP23.63■■□□□ 1.37
PRKCH-219ENST00000555906 NCAPG2Q86XI2 1143 aa23.63■■□□□ 1.37
PRKCH-219ENST00000555906 TRPV1Q8NER1 839 aa23.63■■□□□ 1.37
PRKCH-219ENST00000555906 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms