RNA–Protein interactions for RNA: ENST00000555587.5

RPGRIP1-209, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RPGRIP1, Length 2,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-209ENST00000555587 SNHG28P0DPA3 235 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 XRCC6P12956 609 aaKnown RBP eCLIP9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 CMA1P23946 247 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 GUCY1B3Q02153 619 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 FAM173BQ6P4H8 233 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 ZNF579Q8NAF0 562 aaKnown RBP9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 TMEM47Q9BQJ4 181 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 SPON1Q9HCB6 807 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 TMOD2Q9NZR1 351 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 ESYT2A0FGR8 921 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 SMIM22K7EJ46 135 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 RPS12P25398 132 aaKnown RBP9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 CCDC173Q0VFZ6 552 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 ORC2Q13416 577 aaPredicted RBP9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 PTPAQ15257 358 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 PPP1R18Q6NYC8 613 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 NIM1KQ8IY84 436 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 SRBD1Q8N5C6 995 aaKnown RBP9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 DDX4Q9NQI0 724 aaKnown RBP9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 MTMR4Q9NYA4 1195 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 MAD2L2Q9UI95 211 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 ZNRF3Q9ULT6 936 aa9.64□□□□□ -0.87
RPGRIP1-209ENST00000555587 COL4A5P29400 1685 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 YDJCA8MPS7 323 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 PLEKHA8P1O95397 391 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 TTLL1O95922 423 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 PARP1P09874 1014 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 SHMT1P34896 483 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 ME1P48163 572 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 SF3A1Q15459 793 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 DALRD3Q5D0E6 543 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 ENGASEQ8NFI3 743 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 TNFRSF25Q93038 417 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 TNMDQ9H2S6 317 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 HERC5Q9UII4 1024 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 LIG1P18858 919 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 GPATCH4Q5T3I0 446 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 TATDN1Q6P1N9 297 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 CCAR1Q8IX12 1150 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 STK11IPQ8N1F8 1099 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 MKL1Q969V6 931 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 AIFM3Q96NN9 605 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 PPP1R9BQ96SB3 815 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 DACT1Q9NYF0 836 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 NYAP2Q9P242 653 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 PCDHA7Q9UN72 937 aa9.63□□□□□ -0.87
RPGRIP1-209ENST00000555587 NMT2O60551 498 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 KINO60870 393 aaKnown RBP9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 GUCY1A2P33402 732 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 SCNN1DP51172 638 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 FOSBP53539 338 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 EVX2Q03828 476 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 OTUD7BQ6GQQ9 843 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 KIAA0825Q8IV33 1275 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 SLC44A5Q8NCS7 719 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 CEP95Q96GE4 821 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 FAM198AQ9UFP1 575 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 CLIC4Q9Y696 253 aa9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 V9GY48 417 aaPredicted RBP9.62□□□□□ -0.87
RPGRIP1-209ENST00000555587 SPDYE2BA6NHP3 402 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 F8W031 263 aaPredicted RBP9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 SPDYE6P0CI01 402 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 PICALMQ13492 652 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 TNIP1Q15025 636 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 CFAP100Q494V2 611 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 TPRNQ4KMQ1 711 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 AXDND1Q5T1B0 1012 aaPredicted RBP9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 TMEM179Q6ZVK1 233 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 FAM83AQ86UY5 434 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 FMR1NBQ8N0W7 255 aaPredicted RBP9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 FSIP1Q8NA03 581 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 DCAF4Q8WV16 495 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 FERMT2Q96AC1 680 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 PYM1Q9BRP8 204 aaKnown RBP9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 TAOK3Q9H2K8 898 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 RIOX1Q9H6W3 641 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 GINM1Q9NU53 330 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 BARHL2Q9NY43 387 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 HPSEQ9Y251 543 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 TRIM75PA6NK02 468 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 TBC1D12O60347 775 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 NPY5RQ15761 445 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 KRI1Q8N9T8 703 aaKnown RBP9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 FAM151AQ8WW52 585 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 ZBED3Q96IU2 234 aaPredicted RBP9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 GLT8D2Q9H1C3 349 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 KANSL2Q9H9L4 492 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 USP25Q9UHP3 1055 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 PCDHA4Q9UN74 947 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 STX8Q9UNK0 236 aa9.61□□□□□ -0.87
RPGRIP1-209ENST00000555587 BTBD18B2RXH4 712 aa9.6□□□□□ -0.87
RPGRIP1-209ENST00000555587 DTNBO60941 627 aa9.6□□□□□ -0.87
RPGRIP1-209ENST00000555587 PTPREP23469 700 aa9.6□□□□□ -0.87
RPGRIP1-209ENST00000555587 SNW1Q13573 536 aaKnown RBP9.6□□□□□ -0.87
RPGRIP1-209ENST00000555587 HS1BP3Q53T59 392 aa9.6□□□□□ -0.87
RPGRIP1-209ENST00000555587 RESP18Q5W5W9 173 aa9.6□□□□□ -0.87
RPGRIP1-209ENST00000555587 RRP36Q96EU6 259 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms