RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CTCFLQ8NI51 663 aaPredicted RBP11.89□□□□□ -0.51
SRP54-208ENST00000555557 GLIS2Q9BZE0 524 aaPredicted RBP11.89□□□□□ -0.51
SRP54-208ENST00000555557 NID2Q14112 1375 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 CCDC196A0A1B0GTZ2 297 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 ECE1P42892 770 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 SUPT20HL1Q3ZLR7 823 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 DCAF15Q66K64 600 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 NBPF11Q86T75 865 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 FAM184AQ8NB25 1140 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 ACER1Q8TDN7 264 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 ZKSCAN4Q969J2 545 aaPredicted RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 SLC26A6Q9BXS9 759 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 ZNF341Q9BYN7 854 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 NMRK2Q9NPI5 230 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 NYAP2Q9P242 653 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 ORC3Q9UBD5 711 aaPredicted RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 MAD2L2Q9UI95 211 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 ZDHHC9Q9Y397 364 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 MYH8P13535 1937 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 SSC5DA1L4H1 1573 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 IFNAR1P17181 557 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 GRM4Q14833 912 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 MAP1SQ66K74 1059 aaPredicted RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 CPLX2Q6PUV4 134 aaKnown RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 SRBD1Q8N5C6 995 aaKnown RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 PIBF1Q8WXW3 757 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 MKL1Q969V6 931 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 AIFM3Q96NN9 605 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 WRNIP1Q96S55 665 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
SRP54-208ENST00000555557 RBM28Q9NW13 759 aaKnown RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
SRP54-208ENST00000555557 FRMPD2Q68DX3 1309 aaPredicted RBP11.87□□□□□ -0.51
SRP54-208ENST00000555557 CTNND1O60716 968 aaKnown RBP11.87□□□□□ -0.51
SRP54-208ENST00000555557 CDKL5O76039 1030 aa11.87□□□□□ -0.51
SRP54-208ENST00000555557 ASNSP08243 561 aa11.87□□□□□ -0.51
SRP54-208ENST00000555557 PDHBP11177 359 aa11.87□□□□□ -0.51
SRP54-208ENST00000555557 HMGN5P82970 282 aaKnown RBP11.87□□□□□ -0.51
SRP54-208ENST00000555557 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■□□□□ 8.6
SRP54-208ENST00000555557 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
SRP54-208ENST00000555557 TMTC3Q6ZXV5 915 aa11.87□□□□□ -0.51
SRP54-208ENST00000555557 KLRG1Q96E93 195 aa11.87□□□□□ -0.51
SRP54-208ENST00000555557 CDCA5Q96FF9 252 aa11.87□□□□□ -0.51
SRP54-208ENST00000555557 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
SRP54-208ENST00000555557 WDR90Q96KV7 1748 aa11.87□□□□□ -0.51
SRP54-208ENST00000555557 PALM3A6NDB9 673 aaPredicted RBP11.86□□□□□ -0.51
SRP54-208ENST00000555557 STX6O43752 255 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 USP2O75604 605 aaPredicted RBP11.86□□□□□ -0.51
SRP54-208ENST00000555557 PARP1P09874 1014 aaKnown RBP11.86□□□□□ -0.51
SRP54-208ENST00000555557 KIF5BP33176 963 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 FUT2Q10981 343 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 PPP2R5BQ15173 497 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 ZYXQ15942 572 aaKnown RBP11.86□□□□□ -0.51
SRP54-208ENST00000555557 OTUD7BQ6GQQ9 843 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 CDC37L1Q7L3B6 337 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 HOOK2Q96ED9 719 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 ZNF112Q9UJU3 913 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
SRP54-208ENST00000555557 SCN4AP35499 1836 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 GREB1LQ9C091 1923 aaPredicted RBP11.86□□□□□ -0.51
SRP54-208ENST00000555557 VPS37CA5D8V6 355 aaPredicted RBP11.86□□□□□ -0.51
SRP54-208ENST00000555557 KLRF2D3W0D1 207 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 F5H6K3 240 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
SRP54-208ENST00000555557 NUCB2P80303 420 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 GUCY1B3Q02153 619 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 KLRC3Q07444 240 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 SLC35G1Q2M3R5 365 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 MOB2Q70IA6 237 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 SPICE1Q8N0Z3 855 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 MAP3K14Q99558 947 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 GPCPD1Q9NPB8 672 aa11.86□□□□□ -0.51
SRP54-208ENST00000555557 TRAF5O00463 557 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 CYTH3O43739 400 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 BRD1O95696 1058 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 SNHG28P0DPA3 235 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 DEKP35659 375 aaKnown RBP11.85□□□□□ -0.51
SRP54-208ENST00000555557 KIAA1755Q5JYT7 1200 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 SLFN13Q68D06 897 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 TTBK2Q6IQ55 1244 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 SCYL3Q8IZE3 742 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 NUP88Q99567 741 aaPredicted RBP11.85□□□□□ -0.51
SRP54-208ENST00000555557 ARHGEF10LQ9HCE6 1279 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 ISY1Q9ULR0 285 aaKnown RBP11.85□□□□□ -0.51
SRP54-208ENST00000555557 MTMR6Q9Y217 621 aa11.85□□□□□ -0.51
SRP54-208ENST00000555557 NDUFB10O96000 172 aa11.84□□□□□ -0.51
SRP54-208ENST00000555557 SLC1A4P43007 532 aa11.84□□□□□ -0.51
SRP54-208ENST00000555557 DGKZQ13574 1117 aa11.84□□□□□ -0.51
SRP54-208ENST00000555557 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
SRP54-208ENST00000555557 FOXD4L6Q3SYB3 417 aaPredicted RBP11.84□□□□□ -0.51
SRP54-208ENST00000555557 FOXD4L3Q6VB84 417 aaPredicted RBP11.84□□□□□ -0.51
SRP54-208ENST00000555557 TRIM22Q8IYM9 498 aa11.84□□□□□ -0.51
SRP54-208ENST00000555557 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms