RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 HSPA1BP0DMV9 641 aaKnown RBP11.59□□□□□ -0.55
PSEN1-213ENST00000555386 TRDNQ13061 729 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 TREML2Q5T2D2 321 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 OTUD7BQ6GQQ9 843 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 CHST3Q7LGC8 479 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 PRRT2Q7Z6L0 340 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-213ENST00000555386 NEDD1Q8NHV4 660 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 GBP4Q96PP9 640 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 WDR18Q9BV38 432 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 KANSL2Q9H9L4 492 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 GINM1Q9NU53 330 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 RNF186Q9NXI6 227 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 STX8Q9UNK0 236 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 CASP8AP2Q9UKL3 1982 aa11.59□□□□□ -0.55
PSEN1-213ENST00000555386 GREB1LQ9C091 1923 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-213ENST00000555386 THSD7BQ9C0I4 1608 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 E7EWF7 191 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 PDHXO00330 501 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 ORC4O43929 436 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 TM4SF4P48230 202 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 TAF1CQ15572 869 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-213ENST00000555386 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 CLEC17AQ6ZS10 378 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 STOX1Q6ZVD7 989 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 FASTKD5Q7L8L6 764 aaKnown RBP11.58□□□□□ -0.56
PSEN1-213ENST00000555386 RALYLQ86SE5 291 aaKnown RBP11.58□□□□□ -0.56
PSEN1-213ENST00000555386 SIAH1Q8IUQ4 282 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 JMYQ8N9B5 988 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 ESR2Q92731 530 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 IL17RAQ96F46 866 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
PSEN1-213ENST00000555386 CYP2C8P10632 490 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 MCCP23508 829 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 INHBEP58166 350 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 ANAPC15P60006 121 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 MOGSQ13724 837 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 KIAA1755Q5JYT7 1200 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 L1TD1Q5T7N2 865 aaKnown RBP11.57□□□□□ -0.56
PSEN1-213ENST00000555386 GPAT2Q6NUI2 795 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 KRT23Q9C075 422 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 R3HDMLQ9H3Y0 253 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 CWC22Q9HCG8 908 aaKnown RBP11.57□□□□□ -0.56
PSEN1-213ENST00000555386 IL17RBQ9NRM6 502 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 EMILIN3Q9NT22 766 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 MTMR4Q9NYA4 1195 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 ZSWIM5Q9P217 1185 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 LOC285556D6RIA3 1793 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 C19orf81C9J6K1 198 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 FOXN1O15353 648 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 CD2BP2O95400 341 aaKnown RBP11.57□□□□□ -0.56
PSEN1-213ENST00000555386 TTLL1O95922 423 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 MCM2P49736 904 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 USP14P54578 494 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 CRHR2Q13324 411 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 SKOR2Q2VWA4 1001 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-213ENST00000555386 RNF20Q5VTR2 975 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 CYB5R4Q7L1T6 521 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 REM2Q8IYK8 340 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-213ENST00000555386 NUP88Q99567 741 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-213ENST00000555386 TANGO6Q9C0B7 1094 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 SH2D4AQ9H788 454 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 CNNM2Q9H8M5 875 aa11.57□□□□□ -0.56
PSEN1-213ENST00000555386 IGKV6D-41A0A0C4DH26 115 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 TESPA1A2RU30 521 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-213ENST00000555386 FGRP09769 529 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 PCP11498 1178 aaKnown RBP11.56□□□□□ -0.56
PSEN1-213ENST00000555386 VCAM1P19320 739 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 NUCB2P80303 420 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 ANKRD23Q86SG2 305 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 IQCA1Q86XH1 822 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 PROCA1Q8NCQ7 364 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-213ENST00000555386 NCOA7Q8NI08 942 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 TNPO1Q92973 898 aaKnown RBP11.56□□□□□ -0.56
PSEN1-213ENST00000555386 UBAC1Q9BSL1 405 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 KIAA1683Q9H0B3 1180 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 RPAP3Q9H6T3 665 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-213ENST00000555386 GOPCQ9HD26 462 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 AGTPBP1Q9UPW5 1226 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 TMX2Q9Y320 296 aa11.56□□□□□ -0.56
PSEN1-213ENST00000555386 IFIT3O14879 490 aaKnown RBP11.55□□□□□ -0.56
PSEN1-213ENST00000555386 TRAK2O60296 914 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 ZKSCAN1P17029 563 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-213ENST00000555386 IRX3P78415 501 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-213ENST00000555386 COL9A3Q14050 684 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-213ENST00000555386 SH3D19Q5HYK7 790 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 FAM83BQ5T0W9 1011 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 RASGRP2Q7LDG7 609 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 SMCR8Q8TEV9 937 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-213ENST00000555386 TCEANC2Q96MN5 208 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 LRRC2Q9BYS8 371 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 VCPKMTQ9H867 229 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 ZFYVE28Q9HCC9 887 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 NYAP2Q9P242 653 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 CPA4Q9UI42 421 aa11.55□□□□□ -0.56
PSEN1-213ENST00000555386 PLIN4Q96Q06 1357 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 F5H6K3 240 aa11.54□□□□□ -0.56
PSEN1-213ENST00000555386 PEX10O60683 326 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms