RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 USP17L19D6RCP7 530 aa28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 USP17L20D6RJB6 530 aa28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 IRX3P78415 501 aaPredicted RBP28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 USP17L24Q0WX57 530 aa28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 LSG1Q9H089 658 aaKnown RBP28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 TOMM22Q9NS69 142 aa28.65■■■□□ 2.18
SDR39U1-209ENST00000554947 GCLCP48506 637 aaPredicted RBP28.64■■■□□ 2.18
SDR39U1-209ENST00000554947 NOVP48745 357 aa28.64■■■□□ 2.18
SDR39U1-209ENST00000554947 ATP2B2Q01814 1243 aa28.64■■■□□ 2.18
SDR39U1-209ENST00000554947 SMCR8Q8TEV9 937 aaPredicted RBP28.64■■■□□ 2.18
SDR39U1-209ENST00000554947 GTF3C2Q8WUA4 911 aaPredicted RBP28.64■■■□□ 2.18
SDR39U1-209ENST00000554947 ESR2Q92731 530 aa28.64■■■□□ 2.18
SDR39U1-209ENST00000554947 ERO1AQ96HE7 468 aa28.64■■■□□ 2.18
SDR39U1-209ENST00000554947 CNNM2Q9H8M5 875 aa28.64■■■□□ 2.18
SDR39U1-209ENST00000554947 BCRP11274 1271 aa28.63■■■□□ 2.17
SDR39U1-209ENST00000554947 RRP12Q5JTH9 1297 aaKnown RBP28.63■■■□□ 2.17
SDR39U1-209ENST00000554947 CATSPERGQ6ZRH7 1159 aa28.63■■■□□ 2.17
SDR39U1-209ENST00000554947 CLIP2Q9UDT6 1046 aa28.63■■■□□ 2.17
SDR39U1-209ENST00000554947 PARP14Q460N5 1801 aa28.62■■■□□ 2.17
SDR39U1-209ENST00000554947 WDR46O15213 610 aaKnown RBP28.62■■■□□ 2.17
SDR39U1-209ENST00000554947 KRT23Q9C075 422 aa28.62■■■□□ 2.17
SDR39U1-209ENST00000554947 RPAP3Q9H6T3 665 aaPredicted RBP28.62■■■□□ 2.17
SDR39U1-209ENST00000554947 IL17RBQ9NRM6 502 aa28.62■■■□□ 2.17
SDR39U1-209ENST00000554947 RBM8AQ9Y5S9 174 aaKnown RBP28.62■■■□□ 2.17
SDR39U1-209ENST00000554947 NEDD4P46934 1319 aa28.62■■■□□ 2.17
SDR39U1-209ENST00000554947 RLFQ13129 1914 aa28.61■■■□□ 2.17
SDR39U1-209ENST00000554947 CYP21A2P08686 494 aa28.61■■■□□ 2.17
SDR39U1-209ENST00000554947 ANO2Q9NQ90 1003 aa28.61■■■□□ 2.17
SDR39U1-209ENST00000554947 CPA4Q9UI42 421 aa28.61■■■□□ 2.17
SDR39U1-209ENST00000554947 MGAMO43451 1857 aa28.61■■■□□ 2.17
SDR39U1-209ENST00000554947 CCDC178Q5BJE1 867 aa28.6■■■□□ 2.17
SDR39U1-209ENST00000554947 KIAA1755Q5JYT7 1200 aa28.6■■■□□ 2.17
SDR39U1-209ENST00000554947 GMCL1P1Q8NEA9 526 aa28.6■■■□□ 2.17
SDR39U1-209ENST00000554947 P2RX7Q99572 595 aaKnown RBP28.6■■■□□ 2.17
SDR39U1-209ENST00000554947 HERVK_113P62684 666 aa28.59■■■□□ 2.17
SDR39U1-209ENST00000554947 ARHGEF6Q15052 776 aa28.59■■■□□ 2.17
SDR39U1-209ENST00000554947 FAM110CQ1W6H9 321 aa28.59■■■□□ 2.17
SDR39U1-209ENST00000554947 COL13A1Q5TAT6 717 aaPredicted RBP28.59■■■□□ 2.17
SDR39U1-209ENST00000554947 LBX2Q6XYB7 198 aa28.59■■■□□ 2.17
SDR39U1-209ENST00000554947 TTC14Q96N46 770 aa28.59■■■□□ 2.17
SDR39U1-209ENST00000554947 F5H6K3 240 aa28.58■■■□□ 2.17
SDR39U1-209ENST00000554947 LACTBP83111 547 aaPredicted RBP28.58■■■□□ 2.17
SDR39U1-209ENST00000554947 KLRC3Q07444 240 aa28.58■■■□□ 2.17
SDR39U1-209ENST00000554947 TRDNQ13061 729 aa28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 COG2Q14746 738 aa28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 KIF22Q14807 665 aa28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 CTU1Q7Z7A3 348 aaKnown RBP28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 IQCA1Q86XH1 822 aa28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 SPICE1Q8N0Z3 855 aa28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 HOXC10Q9NYD6 342 aa28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 MORF4L1Q9UBU8 362 aa28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 STX8Q9UNK0 236 aa28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 MYPNQ86TC9 1320 aa28.57■■■□□ 2.16
SDR39U1-209ENST00000554947 NMT2O60551 498 aa28.56■■■□□ 2.16
SDR39U1-209ENST00000554947 KDM4AO75164 1064 aa28.56■■■□□ 2.16
SDR39U1-209ENST00000554947 NECTIN1Q15223 517 aa28.56■■■□□ 2.16
SDR39U1-209ENST00000554947 CD99L2Q8TCZ2 262 aa28.56■■■□□ 2.16
SDR39U1-209ENST00000554947 TANGO6Q9C0B7 1094 aa28.56■■■□□ 2.16
SDR39U1-209ENST00000554947 B4E1Z4 1266 aa28.55■■■□□ 2.16
SDR39U1-209ENST00000554947 NDUFB10O96000 172 aa28.55■■■□□ 2.16
SDR39U1-209ENST00000554947 GNRH1P01148 92 aa28.55■■■□□ 2.16
SDR39U1-209ENST00000554947 PKN2Q16513 984 aaKnown RBP28.55■■■□□ 2.16
SDR39U1-209ENST00000554947 ANKRD13CQ8N6S4 541 aa28.55■■■□□ 2.16
SDR39U1-209ENST00000554947 TOP1P11387 765 aaKnown RBP28.54■■■□□ 2.16
SDR39U1-209ENST00000554947 DGKHQ86XP1 1220 aa28.54■■■□□ 2.16
SDR39U1-209ENST00000554947 LRRC47Q8N1G4 583 aaKnown RBP28.54■■■□□ 2.16
SDR39U1-209ENST00000554947 ZSWIM5Q9P217 1185 aa28.54■■■□□ 2.16
SDR39U1-209ENST00000554947 RABGAP1Q9Y3P9 1069 aa28.54■■■□□ 2.16
SDR39U1-209ENST00000554947 A0A0G2JMZ2 1700 aa28.54■■■□□ 2.16
SDR39U1-209ENST00000554947 SPDYE16A6NNV3 312 aaPredicted RBP28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 E7EWF7 191 aa28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 EPB41L2O43491 1005 aaKnown RBP28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 REC8O95072 547 aa28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 RNF20Q5VTR2 975 aa28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 NCOA7Q8NI08 942 aa28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 NKX2-3Q8TAU0 364 aa28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 ANKS1AQ92625 1134 aa28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 GMCL1Q96IK5 515 aa28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 DOCK3Q8IZD9 2030 aa28.53■■■□□ 2.16
SDR39U1-209ENST00000554947 SLC27A2O14975 620 aa28.52■■■□□ 2.16
SDR39U1-209ENST00000554947 DSG3P32926 999 aa28.52■■■□□ 2.16
SDR39U1-209ENST00000554947 CREB3L3Q68CJ9 461 aa28.52■■■□□ 2.16
SDR39U1-209ENST00000554947 SLFN13Q68D06 897 aa28.52■■■□□ 2.16
SDR39U1-209ENST00000554947 RCSD1Q6JBY9 416 aa28.52■■■□□ 2.16
SDR39U1-209ENST00000554947 MB21D1Q8N884 522 aa28.52■■■□□ 2.16
SDR39U1-209ENST00000554947 EFCC1Q9HA90 598 aa28.52■■■□□ 2.16
SDR39U1-209ENST00000554947 RBPJLQ9UBG7 517 aa28.52■■■□□ 2.16
SDR39U1-209ENST00000554947 RAD21O60216 631 aa28.51■■■□□ 2.15
SDR39U1-209ENST00000554947 FLOT1O75955 427 aa28.51■■■□□ 2.15
SDR39U1-209ENST00000554947 FAM83BQ5T0W9 1011 aa28.51■■■□□ 2.15
SDR39U1-209ENST00000554947 OTOP1Q7RTM1 612 aa28.51■■■□□ 2.15
SDR39U1-209ENST00000554947 RALYLQ86SE5 291 aaKnown RBP28.51■■■□□ 2.15
SDR39U1-209ENST00000554947 GPRC5AQ8NFJ5 357 aa28.51■■■□□ 2.15
SDR39U1-209ENST00000554947 ZSCAN10Q96SZ4 725 aaPredicted RBP28.51■■■□□ 2.15
SDR39U1-209ENST00000554947 TMEM47Q9BQJ4 181 aa28.51■■■□□ 2.15
SDR39U1-209ENST00000554947 ZSWIM8A7E2V4 1837 aa28.5■■■□□ 2.15
SDR39U1-209ENST00000554947 TXNRD2Q9NNW7 524 aa28.5■■■□□ 2.15
SDR39U1-209ENST00000554947 ADAMTS5Q9UNA0 930 aa28.5■■■□□ 2.15
SDR39U1-209ENST00000554947 COL11A1P12107 1806 aaPredicted RBP28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 PSMC4P43686 418 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms