RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 IFNL3Q8IZI9 196 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 EXOC6Q8TAG9 804 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 NUDT12Q9BQG2 462 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 RNF208Q9H0X6 261 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 RPAP3Q9H6T3 665 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-213ENST00000554508 MKNK2Q9HBH9 465 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 ROBO3Q96MS0 1386 aa10.42□□□□□ -0.74
ACTN1-213ENST00000554508 SMIM22K7EJ46 135 aa10.42□□□□□ -0.74
ACTN1-213ENST00000554508 INHAP05111 366 aa10.42□□□□□ -0.74
ACTN1-213ENST00000554508 XRCC5P13010 732 aaKnown RBP10.42□□□□□ -0.74
ACTN1-213ENST00000554508 GJA8P48165 433 aa10.42□□□□□ -0.74
ACTN1-213ENST00000554508 PRPF38BQ5VTL8 546 aaKnown RBP10.42□□□□□ -0.74
ACTN1-213ENST00000554508 PLEKHH3Q7Z736 793 aa10.42□□□□□ -0.74
ACTN1-213ENST00000554508 SIAH1Q8IUQ4 282 aa10.42□□□□□ -0.74
ACTN1-213ENST00000554508 TRMT44Q8IYL2 757 aaKnown RBP10.42□□□□□ -0.74
ACTN1-213ENST00000554508 SOCS4Q8WXH5 440 aa10.42□□□□□ -0.74
ACTN1-213ENST00000554508 VCPKMTQ9H867 229 aa10.42□□□□□ -0.74
ACTN1-213ENST00000554508 CWC22Q9HCG8 908 aaKnown RBP10.42□□□□□ -0.74
ACTN1-213ENST00000554508 EPB41L4AQ9HCS5 686 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-213ENST00000554508 SPDYE16A6NNV3 312 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-213ENST00000554508 WDR46O15213 610 aaKnown RBP10.41□□□□□ -0.74
ACTN1-213ENST00000554508 PEX10O60683 326 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 CNMDO75829 334 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 SGPL1O95470 568 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 HMGCRP04035 888 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 SLC3A2P08195 630 aaKnown RBP10.41□□□□□ -0.74
ACTN1-213ENST00000554508 EEF2P13639 858 aaKnown RBP10.41□□□□□ -0.74
ACTN1-213ENST00000554508 DSG3P32926 999 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 POTEEQ6S8J3 1075 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 GPR142Q7Z601 462 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 ZNF444Q8N0Y2 327 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-213ENST00000554508 MB21D1Q8N884 522 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 USP6NLQ92738 828 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 SEC62Q99442 399 aaKnown RBP10.41□□□□□ -0.74
ACTN1-213ENST00000554508 TANGO6Q9C0B7 1094 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 LNPKQ9C0E8 428 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 NAPBQ9H115 298 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 UNC93B1Q9H1C4 597 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 PORCNQ9H237 461 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 GOPCQ9HD26 462 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 HELLSQ9NRZ9 838 aa10.41□□□□□ -0.74
ACTN1-213ENST00000554508 COL11A1P12107 1806 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-213ENST00000554508 IGHDP01880 384 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 NEFLP07196 543 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 CYP2B6P20813 491 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 RASA1P20936 1047 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 RGS2P41220 211 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 ATP2B2Q01814 1243 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 PDE4BQ07343 736 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 KIAA1755Q5JYT7 1200 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 MORN1Q5T089 497 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 B4GALNT3Q6L9W6 998 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 CHD1LQ86WJ1 897 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 STK11IPQ8N1F8 1099 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 U2AF1L4Q8WU68 220 aaKnown RBP10.4□□□□□ -0.74
ACTN1-213ENST00000554508 OSBPL3Q9H4L5 887 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 HMX1Q9NP08 348 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-213ENST00000554508 PAK6Q9NQU5 681 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-213ENST00000554508 BTBD7Q9P203 1132 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 NYAP2Q9P242 653 aa10.4□□□□□ -0.74
ACTN1-213ENST00000554508 MKI67P46013 3256 aaKnown RBP10.39□□□□□ -0.75
ACTN1-213ENST00000554508 RPTORQ8N122 1335 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 A0A0G2JMZ2 1700 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 SLC15A5A6NIM6 579 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 STRNO43815 780 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 FLOT1O75955 427 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 PTPREP23469 700 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 NUCB1Q02818 461 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 MAP2K5Q13163 448 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 CLEC10AQ8IUN9 316 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 SPICE1Q8N0Z3 855 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 SHCBP1Q8NEM2 672 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 MKL1Q969V6 931 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 SHISA4Q96DD7 197 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 DEFB118Q96PH6 123 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.39□□□□□ -0.75
ACTN1-213ENST00000554508 SPATC1LQ9H0A9 340 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 IVNS1ABPQ9Y6Y0 642 aa10.39□□□□□ -0.75
ACTN1-213ENST00000554508 IGKV6D-41A0A0C4DH26 115 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 TRIM6-TRIM34B2RNG4 842 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 TFRCP02786 760 aaKnown RBP10.38□□□□□ -0.75
ACTN1-213ENST00000554508 PPARAQ07869 468 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 ALX1Q15699 326 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 MCMDC2Q4G0Z9 681 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 PPP4R3BQ5MIZ7 849 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 WDR78Q5VTH9 848 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 PLEKHM2Q8IWE5 1019 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 NEDD1Q8NHV4 660 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 TRIB2Q92519 343 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 APBA2Q99767 749 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.38□□□□□ -0.75
ACTN1-213ENST00000554508 MROH8Q9H579 483 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 SYNPO2Q9UMS6 1093 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 ADAMTS5Q9UNA0 930 aa10.38□□□□□ -0.75
ACTN1-213ENST00000554508 PRDM1O75626 825 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 SLC25A27O95847 323 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 TTLL1O95922 423 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 HOXC6P09630 235 aa10.37□□□□□ -0.75
ACTN1-213ENST00000554508 TSPY3P0CV98 308 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms