RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 C19orf73Q9NVV2 129 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 CYP8B1Q9UNU6 501 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 SAMD9Q5K651 1589 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 CLSPNQ9HAW4 1339 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 TRAPPC8Q9Y2L5 1435 aa6.16□□□□□ -1.42
ATXN3-227ENST00000554491 FAM155AB1AL88 458 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-227ENST00000554491 BRD1O95696 1058 aa6.16□□□□□ -1.42
ATXN3-227ENST00000554491 FBLN7Q53RD9 439 aa6.16□□□□□ -1.42
ATXN3-227ENST00000554491 ANKRD24Q8TF21 1146 aa6.16□□□□□ -1.42
ATXN3-227ENST00000554491 GAL3ST3Q96A11 431 aa6.16□□□□□ -1.42
ATXN3-227ENST00000554491 MIPEPQ99797 713 aa6.16□□□□□ -1.42
ATXN3-227ENST00000554491 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
ATXN3-227ENST00000554491 TPX2Q9ULW0 747 aaKnown RBP6.16□□□□□ -1.42
ATXN3-227ENST00000554491 NUP153P49790 1475 aaKnown RBP6.15□□□□□ -1.42
ATXN3-227ENST00000554491 SYNMO15061 1565 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 NEURL4Q96JN8 1562 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 H3BS24 57 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 USP17L7P0C7H9 530 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 SCARA3Q6AZY7 606 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 ALG1LQ6GMV1 187 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 HDXQ7Z353 690 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 MFSD4AQ8N468 514 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 WNT10AQ9GZT5 417 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 C12orf49Q9H741 205 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 FAM53CQ9NYF3 392 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 ST14Q9Y5Y6 855 aa6.15□□□□□ -1.42
ATXN3-227ENST00000554491 NPATQ14207 1427 aa6.15□□□□□ -1.43
ATXN3-227ENST00000554491 GIPC1O14908 333 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 ZNF865P0CJ78 1059 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-227ENST00000554491 AFMP43652 599 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 WIPI1Q5MNZ9 446 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-227ENST00000554491 SFRP5Q5T4F7 317 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 PRR23BQ6ZRT6 265 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 ZSCAN29Q8IWY8 852 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-227ENST00000554491 KIRREL1Q96J84 757 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 ASB16Q96NS5 453 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 CAPN6Q9Y6Q1 641 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 PTPRKQ15262 1439 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 CNTLNQ9NXG0 1405 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 ZNF518AQ6AHZ1 1483 aa6.14□□□□□ -1.43
ATXN3-227ENST00000554491 CBX7O95931 251 aa6.13□□□□□ -1.43
ATXN3-227ENST00000554491 P4HBP07237 508 aaKnown RBP6.13□□□□□ -1.43
ATXN3-227ENST00000554491 GLI1P08151 1106 aa6.13□□□□□ -1.43
ATXN3-227ENST00000554491 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
ATXN3-227ENST00000554491 ETF1P62495 437 aaKnown RBP6.13□□□□□ -1.43
ATXN3-227ENST00000554491 LETMD1Q6P1Q0 360 aa6.13□□□□□ -1.43
ATXN3-227ENST00000554491 C22orf34Q6ZV56 151 aa6.13□□□□□ -1.43
ATXN3-227ENST00000554491 XAGE3Q8WTP9 111 aa6.13□□□□□ -1.43
ATXN3-227ENST00000554491 FAM8A1Q9UBU6 413 aa6.13□□□□□ -1.43
ATXN3-227ENST00000554491 RGS17Q9UGC6 210 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-227ENST00000554491 SPG7Q9UQ90 795 aa6.13□□□□□ -1.43
ATXN3-227ENST00000554491 SCAPERQ9BY12 1400 aa6.13□□□□□ -1.43
ATXN3-227ENST00000554491 TOM1O60784 492 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 HSP90B1P14625 803 aaKnown RBP6.12□□□□□ -1.43
ATXN3-227ENST00000554491 CAP2P40123 477 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 RAP1GAPP47736 663 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 CLTCQ00610 1675 aaKnown RBP6.12□□□□□ -1.43
ATXN3-227ENST00000554491 TMEM67Q5HYA8 995 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 PRAMEF13Q5VWM6 474 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 TTBK2Q6IQ55 1244 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 MPZL3Q6UWV2 235 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 SV2BQ7L1I2 683 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 NPAS4Q8IUM7 802 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 HID1Q8IV36 788 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 VWDEQ8N2E2 1590 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 BHLHE22Q8NFJ8 381 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-227ENST00000554491 KCNK12Q9HB15 430 aa6.12□□□□□ -1.43
ATXN3-227ENST00000554491 TTF2Q9UNY4 1162 aaKnown RBP6.12□□□□□ -1.43
ATXN3-227ENST00000554491 STRCP1A6NGW2 1772 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 SHANK2Q9UPX8 1470 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 CFPP27918 469 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 GRK4P32298 578 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 GDNFP39905 211 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 ATP2B2Q01814 1243 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 SYDE1Q6ZW31 735 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-227ENST00000554491 MFSD2AQ8NA29 543 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 UBE2FQ969M7 185 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 PCDHB5Q9Y5E4 795 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 SNCAIPQ9Y6H5 919 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 IVNS1ABPQ9Y6Y0 642 aa6.11□□□□□ -1.43
ATXN3-227ENST00000554491 ITSN2Q9NZM3 1697 aa6.1□□□□□ -1.43
ATXN3-227ENST00000554491 DNMT1P26358 1616 aaKnown RBP6.1□□□□□ -1.43
ATXN3-227ENST00000554491 LOC105371045A0A1W2PR82 267 aa6.1□□□□□ -1.43
ATXN3-227ENST00000554491 TSPAN15O95858 294 aa6.1□□□□□ -1.43
ATXN3-227ENST00000554491 CST3P01034 146 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-227ENST00000554491 KRT1P04264 644 aa6.1□□□□□ -1.43
ATXN3-227ENST00000554491 SEPT6Q14141 434 aa6.1□□□□□ -1.43
ATXN3-227ENST00000554491 C1QL4Q86Z23 238 aa6.1□□□□□ -1.43
ATXN3-227ENST00000554491 DPH2Q9BQC3 489 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-227ENST00000554491 ZSWIM5Q9P217 1185 aa6.1□□□□□ -1.43
ATXN3-227ENST00000554491 BCCIPQ9P287 314 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATXN3-227ENST00000554491 KIDINS220Q9ULH0 1771 aa6.09□□□□□ -1.43
ATXN3-227ENST00000554491 WASH4PA8MWX3 477 aa6.09□□□□□ -1.43
ATXN3-227ENST00000554491 GFRA2O00451 464 aa6.09□□□□□ -1.43
ATXN3-227ENST00000554491 LDHBP07195 334 aaKnown RBP6.09□□□□□ -1.43
ATXN3-227ENST00000554491 TNK2Q07912 1038 aa6.09□□□□□ -1.43
ATXN3-227ENST00000554491 LCNL1Q6ZST4 164 aa6.09□□□□□ -1.43
ATXN3-227ENST00000554491 CDH24Q86UP0 819 aa6.09□□□□□ -1.43
ATXN3-227ENST00000554491 ALPK1Q96QP1 1244 aa6.09□□□□□ -1.43
ATXN3-227ENST00000554491 DIRC2Q96SL1 478 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms