RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 VCAM1P19320 739 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 FLT3LGP49771 235 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L24Q0WX57 530 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 SEPT2Q15019 361 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 ANKRD45Q5TZF3 282 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 CTR9Q6PD62 1173 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 SLC44A5Q8NCS7 719 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 ACER1Q8TDN7 264 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 OTUD7AQ8TE49 926 aaPredicted RBP12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 GABRQQ9UN88 632 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 GSG1L2A8MUP6 293 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 MPHOSPH10O00566 681 aaKnown RBP12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 GPAA1O43292 621 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 ADCY3O60266 1144 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 GABBR2O75899 941 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 CDK8P49336 464 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 UBXN2AP68543 259 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 LBX2Q6XYB7 198 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 SMC5Q8IY18 1101 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 DYNLL2Q96FJ2 89 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 FSD1Q9BTV5 496 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 SH2D4AQ9H788 454 aa12.47□□□□□ -0.41
PTCD2P1-201ENST00000554393 CYP2D7A0A087X1C5 515 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 AKR1B1P15121 316 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 PDE1AP54750 535 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 ERVK-9P63128 1117 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 ERVK-24P63145 666 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 ZYXQ15942 572 aaKnown RBP12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 CATSPERGQ6ZRH7 1159 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 LPAR1Q92633 364 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 ARHGEF10LQ9HCE6 1279 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 TXNRD2Q9NNW7 524 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 TMX2Q9Y320 296 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 RABGAP1Q9Y3P9 1069 aa12.46□□□□□ -0.41
PTCD2P1-201ENST00000554393 MYH4Q9Y623 1939 aa12.46□□□□□ -0.42
PTCD2P1-201ENST00000554393 A0A1W2PRG0 241 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 CAPN2P17655 700 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 EN2P19622 333 aaPredicted RBP12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 MAPK4P31152 587 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 ICA1Q05084 483 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 ZMYM1Q5SVZ6 1142 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 NKX2-3Q8TAU0 364 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 SOCS4Q8WXH5 440 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 EVI5LQ96CN4 794 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 NACAP1Q9BZK3 213 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 RPAP3Q9H6T3 665 aaPredicted RBP12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 ZNF287Q9HBT7 754 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 EPB41L4AQ9HCS5 686 aaPredicted RBP12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 GJD2Q9UKL4 321 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 COLQQ9Y215 455 aaPredicted RBP12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 ZNF236Q9UL36 1845 aa12.45□□□□□ -0.42
PTCD2P1-201ENST00000554393 PATL2C9JE40 543 aaKnown RBP12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 M0R2C6 588 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 GJB1P08034 283 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 CCL5P13501 91 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 TDO2P48775 406 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 CCNA1P78396 465 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 MTFR1Q15390 333 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 POTEEQ6S8J3 1075 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 SIAH1Q8IUQ4 282 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 VCPKMTQ9H867 229 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 KANSL2Q9H9L4 492 aa12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 BIN2Q9UBW5 565 aaPredicted RBP12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 COL11A1P12107 1806 aaPredicted RBP12.44□□□□□ -0.42
PTCD2P1-201ENST00000554393 SPDYE16A6NNV3 312 aaPredicted RBP12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 SMIM22K7EJ46 135 aa12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 INHAP05111 366 aa12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 XRCC5P13010 732 aaKnown RBP12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 ELNP15502 786 aa12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 GJA8P48165 433 aa12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 COG2Q14746 738 aa12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 IFNL3Q8IZI9 196 aa12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 EXOC6Q8TAG9 804 aa12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
PTCD2P1-201ENST00000554393 MINDY4BA8MYZ0 360 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 WDR46O15213 610 aaKnown RBP12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 CNMDO75829 334 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 MYCP01106 439 aaPredicted RBP12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 HMGCRP04035 888 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 APPP05067 770 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 RASA1P20936 1047 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 Q3C1V9 767 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 GPR142Q7Z601 462 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 CCAR1Q8IX12 1150 aaKnown RBP12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 TRMT44Q8IYL2 757 aaKnown RBP12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 MB21D1Q8N884 522 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 SEC62Q99442 399 aaKnown RBP12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 NUDT12Q9BQG2 462 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 TANGO6Q9C0B7 1094 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 LNPKQ9C0E8 428 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 RNF208Q9H0X6 261 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 PORCNQ9H237 461 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms