RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FMR1Q06787 632 aaKnown RBP eCLIP7.39□□□□□ -1.23
VPS33B-203ENST00000554264 SETDB1Q15047 1291 aa7.39□□□□□ -1.23
VPS33B-203ENST00000554264 CCDC27Q2M243 656 aa7.39□□□□□ -1.23
VPS33B-203ENST00000554264 PLA2G4EQ3MJ16 856 aa7.39□□□□□ -1.23
VPS33B-203ENST00000554264 KIAA0319Q5VV43 1072 aa7.39□□□□□ -1.23
VPS33B-203ENST00000554264 MPRIPQ6WCQ1 1025 aa7.39□□□□□ -1.23
VPS33B-203ENST00000554264 DNAJC5GQ8N7S2 189 aa7.39□□□□□ -1.23
VPS33B-203ENST00000554264 LAS1LQ9Y4W2 734 aaKnown RBP7.39□□□□□ -1.23
VPS33B-203ENST00000554264 SPATA31C1P0DKV0 1188 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 SELPP16109 830 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 PTMSP20962 102 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 CDC27P30260 824 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 ENOX2Q16206 610 aaKnown RBP7.38□□□□□ -1.23
VPS33B-203ENST00000554264 HGSNATQ68CP4 663 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 SHISA2Q6UWI4 295 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 CD163Q86VB7 1156 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 FBXO11Q86XK2 927 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 WDR63Q8IWG1 891 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 ZSCAN29Q8IWY8 852 aaPredicted RBP7.38□□□□□ -1.23
VPS33B-203ENST00000554264 USHBP1Q8N6Y0 703 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 GALNT11Q8NCW6 608 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 BHLHE41Q9C0J9 482 aaPredicted RBP7.38□□□□□ -1.23
VPS33B-203ENST00000554264 SOX13Q9UN79 622 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 PPME1Q9Y570 386 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 C4BP0C0L5 1744 aa7.38□□□□□ -1.23
VPS33B-203ENST00000554264 PNMA6FA0A0J9YX94 578 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 ANKRD33BA6NCL7 494 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 SPDYE3A6NKU9 549 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 C1QTNF9BB2RNN3 333 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 P4HBP07237 508 aaKnown RBP7.37□□□□□ -1.23
VPS33B-203ENST00000554264 PTPRAP18433 802 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 GRIA4P48058 902 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 TGFB2P61812 414 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 CNGB1Q14028 1251 aaPredicted RBP7.37□□□□□ -1.23
VPS33B-203ENST00000554264 SPRED3Q2MJR0 410 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 VN1R5Q7Z5H4 357 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 AMIGO3Q86WK7 504 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 CCNJLQ8IV13 435 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 C16orf71Q8IYS4 520 aaPredicted RBP7.37□□□□□ -1.23
VPS33B-203ENST00000554264 MUC3BQ9H195 1237 aa7.37□□□□□ -1.23
VPS33B-203ENST00000554264 FLT4P35916 1363 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 KIF24Q5T7B8 1368 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 ANKRD26Q9UPS8 1709 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 DLL1O00548 723 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 CYP27B1O15528 508 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 PLIN1O60240 522 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 MMP10P09238 476 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 FBLN1P23142 703 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 CANXP27824 592 aaKnown RBP7.36□□□□□ -1.23
VPS33B-203ENST00000554264 MAPK8P45983 427 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 FSTL1Q12841 308 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 RRS1Q15050 365 aaKnown RBP7.36□□□□□ -1.23
VPS33B-203ENST00000554264 PRRT3Q5FWE3 981 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 ALYREFQ86V81 257 aaKnown RBP7.36□□□□□ -1.23
VPS33B-203ENST00000554264 DTWD1Q8N5C7 304 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 JMYQ8N9B5 988 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 GLIS3Q8NEA6 775 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 ASAP3Q8TDY4 903 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 CFAP53Q96M91 514 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 CHMP4BQ9H444 224 aaKnown RBP7.36□□□□□ -1.23
VPS33B-203ENST00000554264 RWDD1Q9H446 243 aaPredicted RBP7.36□□□□□ -1.23
VPS33B-203ENST00000554264 MYH16Q9H6N6 1097 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 TAF1LQ8IZX4 1826 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 PXDNLA1KZ92 1463 aa7.36□□□□□ -1.23
VPS33B-203ENST00000554264 PLEKHG2Q9H7P9 1386 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 ELNP15502 786 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 RAC1P63000 192 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 ARHGAP27Q6ZUM4 889 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 CACTIN-AS1Q8N1I8 211 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 NLGN1Q8N2Q7 840 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 LINC00116Q8NCU8 138 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 BSNDQ8WZ55 320 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 PIGBQ92521 554 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 RUNDC1Q96C34 613 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 LIN7BQ9HAP6 207 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 NMRK2Q9NPI5 230 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 RNF19AQ9NV58 838 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 KCNK4Q9NYG8 393 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 SPG7Q9UQ90 795 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 TOGARAM1Q9Y4F4 1720 aa7.35□□□□□ -1.23
VPS33B-203ENST00000554264 UBR3Q6ZT12 1888 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 RGPD2P0DJD1 1756 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 SOX1O00570 391 aaPredicted RBP7.34□□□□□ -1.23
VPS33B-203ENST00000554264 FYB1O15117 783 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 PRELPP51888 382 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 GRM2Q14416 872 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 HSP90AB2PQ58FF8 381 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 SMIM5Q71RC9 77 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 NPAS4Q8IUM7 802 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 EHD4Q9H223 541 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 TMOD3Q9NYL9 352 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 C10orf71Q711Q0 1435 aa7.34□□□□□ -1.23
VPS33B-203ENST00000554264 KIF16BQ96L93 1317 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 WDR90Q96KV7 1748 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 A0A096LPE4 126 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 A0A0G2JLW4 131 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 A0A1W2PPZ6 126 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 FSCN2O14926 492 aa7.33□□□□□ -1.24
VPS33B-203ENST00000554264 DDX3YO15523 660 aaKnown RBP7.33□□□□□ -1.24
VPS33B-203ENST00000554264 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms