RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 DBNDD2Q9BQY9 259 aa16.93■□□□□ 0.3
NEDD1-206ENST00000554226 MOV10L1Q9BXT6 1211 aaKnown RBP16.93■□□□□ 0.3
NEDD1-206ENST00000554226 RPAP3Q9H6T3 665 aaPredicted RBP16.93■□□□□ 0.3
NEDD1-206ENST00000554226 ZNFX1Q9P2E3 1918 aaKnown RBP16.93■□□□□ 0.3
NEDD1-206ENST00000554226 BDP1A6H8Y1 2624 aa16.93■□□□□ 0.3
NEDD1-206ENST00000554226 SHMT1P34896 483 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
NEDD1-206ENST00000554226 POLA2Q14181 598 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 COG2Q14746 738 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 RAB3GAP1Q15042 981 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 CERKLQ49MI3 558 aaPredicted RBP16.92■□□□□ 0.3
NEDD1-206ENST00000554226 DPP9Q86TI2 863 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 PIH1D3Q9NQM4 214 aaKnown RBP16.92■□□□□ 0.3
NEDD1-206ENST00000554226 HOXC10Q9NYD6 342 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 NRBP1Q9UHY1 535 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 PHF24Q9UPV7 400 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 NAV1Q8NEY1 1877 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 SMCHD1A6NHR9 2005 aa16.92■□□□□ 0.3
NEDD1-206ENST00000554226 GUCY1A2P33402 732 aa16.91■□□□□ 0.3
NEDD1-206ENST00000554226 ZAP70P43403 619 aa16.91■□□□□ 0.3
NEDD1-206ENST00000554226 GRIN2CQ14957 1233 aa16.91■□□□□ 0.3
NEDD1-206ENST00000554226 LRRC41Q15345 812 aa16.91■□□□□ 0.3
NEDD1-206ENST00000554226 MB21D1Q8N884 522 aa16.91■□□□□ 0.3
NEDD1-206ENST00000554226 RNPC3Q96LT9 517 aaKnown RBP16.91■□□□□ 0.3
NEDD1-206ENST00000554226 SPATC1LQ9H0A9 340 aa16.91■□□□□ 0.3
NEDD1-206ENST00000554226 MROH8Q9H579 483 aa16.91■□□□□ 0.3
NEDD1-206ENST00000554226 SLC5A4Q9NY91 659 aa16.91■□□□□ 0.3
NEDD1-206ENST00000554226 TACC3Q9Y6A5 838 aa16.91■□□□□ 0.3
NEDD1-206ENST00000554226 KIAA0355O15063 1070 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 COBLO75128 1261 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 CYP7A1P22680 504 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 ITGB8P26012 769 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 ADCYAP1R1P41586 468 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 EPHB4P54760 987 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 GABPAQ06546 454 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 SSH3Q8TE77 659 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 CABP5Q9NP86 173 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 RAPGEFL1Q9UHV5 662 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 PLXNA1Q9UIW2 1896 aa16.9■□□□□ 0.3
NEDD1-206ENST00000554226 CHD9Q3L8U1 2897 aa16.89■□□□□ 0.29
NEDD1-206ENST00000554226 ERCC3P19447 782 aa16.89■□□□□ 0.29
NEDD1-206ENST00000554226 USP5P45974 858 aa16.89■□□□□ 0.29
NEDD1-206ENST00000554226 TLE2Q04725 743 aa16.89■□□□□ 0.29
NEDD1-206ENST00000554226 DBNLQ9UJU6 430 aaKnown RBP16.89■□□□□ 0.29
NEDD1-206ENST00000554226 MYH8P13535 1937 aa16.89■□□□□ 0.29
NEDD1-206ENST00000554226 A0A1W2PRG0 241 aa16.88■□□□□ 0.29
NEDD1-206ENST00000554226 CLTBP09497 229 aa16.88■□□□□ 0.29
NEDD1-206ENST00000554226 TRIM27P14373 513 aa16.88■□□□□ 0.29
NEDD1-206ENST00000554226 DNAJB2P25686 324 aa16.88■□□□□ 0.29
NEDD1-206ENST00000554226 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
NEDD1-206ENST00000554226 MAML3Q96JK9 1138 aa16.88■□□□□ 0.29
NEDD1-206ENST00000554226 COL11A1P12107 1806 aaPredicted RBP16.88■□□□□ 0.29
NEDD1-206ENST00000554226 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
NEDD1-206ENST00000554226 PLA2G5P39877 138 aa16.87■□□□□ 0.29
NEDD1-206ENST00000554226 PLCD1P51178 756 aa16.87■□□□□ 0.29
NEDD1-206ENST00000554226 SEPT2Q15019 361 aa16.87■□□□□ 0.29
NEDD1-206ENST00000554226 MIGA1Q8NAN2 632 aa16.87■□□□□ 0.29
NEDD1-206ENST00000554226 FERMT2Q96AC1 680 aa16.87■□□□□ 0.29
NEDD1-206ENST00000554226 TOX2Q96NM4 488 aa16.87■□□□□ 0.29
NEDD1-206ENST00000554226 RIOK1Q9BRS2 568 aaKnown RBP16.87■□□□□ 0.29
NEDD1-206ENST00000554226 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
NEDD1-206ENST00000554226 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-206ENST00000554226 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-206ENST00000554226 IDH1O75874 414 aaKnown RBP16.86■□□□□ 0.29
NEDD1-206ENST00000554226 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-206ENST00000554226 DSG3P32926 999 aa16.86■□□□□ 0.29
NEDD1-206ENST00000554226 ANKRD33Q7Z3H0 272 aa16.86■□□□□ 0.29
NEDD1-206ENST00000554226 MAGEB6Q8N7X4 407 aa16.86■□□□□ 0.29
NEDD1-206ENST00000554226 ATXN2LQ8WWM7 1075 aaKnown RBP16.86■□□□□ 0.29
NEDD1-206ENST00000554226 ZNF576Q9H609 170 aa16.86■□□□□ 0.29
NEDD1-206ENST00000554226 XPNPEP3Q9NQH7 507 aa16.86■□□□□ 0.29
NEDD1-206ENST00000554226 DIS3Q9Y2L1 958 aaKnown RBP16.86■□□□□ 0.29
NEDD1-206ENST00000554226 RARBP10826 455 aa16.85■□□□□ 0.29
NEDD1-206ENST00000554226 FPGSQ05932 587 aa16.85■□□□□ 0.29
NEDD1-206ENST00000554226 RNF180Q86T96 592 aa16.85■□□□□ 0.29
NEDD1-206ENST00000554226 TANGO6Q9C0B7 1094 aa16.85■□□□□ 0.29
NEDD1-206ENST00000554226 ADAMTS5Q9UNA0 930 aa16.85■□□□□ 0.29
NEDD1-206ENST00000554226 ZNF316A6NFI3 1004 aaPredicted RBP16.84■□□□□ 0.29
NEDD1-206ENST00000554226 SLC25A27O95847 323 aa16.84■□□□□ 0.29
NEDD1-206ENST00000554226 FCER1AP12319 257 aa16.84■□□□□ 0.29
NEDD1-206ENST00000554226 RAG1P15918 1043 aa16.84■□□□□ 0.29
NEDD1-206ENST00000554226 ATP8B2P98198 1209 aa16.84■□□□□ 0.29
NEDD1-206ENST00000554226 MAP3K12Q12852 859 aa16.84■□□□□ 0.29
NEDD1-206ENST00000554226 PRAMEF19Q5SWL8 479 aa16.84■□□□□ 0.29
NEDD1-206ENST00000554226 TMEM179Q6ZVK1 233 aa16.84■□□□□ 0.29
NEDD1-206ENST00000554226 TSEN34Q9BSV6 310 aaKnown RBP16.84■□□□□ 0.29
NEDD1-206ENST00000554226 TLR7Q9NYK1 1049 aaKnown RBP16.84■□□□□ 0.29
NEDD1-206ENST00000554226 A0A1W2PQ45 241 aaPredicted RBP16.83■□□□□ 0.28
NEDD1-206ENST00000554226 A0A1W2PQY0 241 aa16.83■□□□□ 0.28
NEDD1-206ENST00000554226 ADAMTS4O75173 837 aa16.83■□□□□ 0.28
NEDD1-206ENST00000554226 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.28
NEDD1-206ENST00000554226 KIAA1755Q5JYT7 1200 aa16.83■□□□□ 0.28
NEDD1-206ENST00000554226 TIFAQ96CG3 184 aa16.83■□□□□ 0.28
NEDD1-206ENST00000554226 EAF2Q96CJ1 260 aaPredicted RBP16.83■□□□□ 0.28
NEDD1-206ENST00000554226 ASB2Q96Q27 587 aa16.83■□□□□ 0.28
NEDD1-206ENST00000554226 TINF2Q9BSI4 451 aa16.83■□□□□ 0.28
NEDD1-206ENST00000554226 THEGQ9P2T0 379 aa16.83■□□□□ 0.28
NEDD1-206ENST00000554226 TMX2Q9Y320 296 aa16.83■□□□□ 0.28
NEDD1-206ENST00000554226 FAAP100Q0VG06 881 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms