RNA–Protein interactions for RNA: ENST00000554207.1

PSMA3-205, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-205ENST00000554207 NBPF6Q5VWK0 638 aa7.89□□□□□ -1.15
PSMA3-205ENST00000554207 GIMAP6Q6P9H5 292 aa7.89□□□□□ -1.15
PSMA3-205ENST00000554207 VHLLQ6RSH7 139 aa7.89□□□□□ -1.15
PSMA3-205ENST00000554207 FAM178BQ8IXR5 827 aa7.89□□□□□ -1.15
PSMA3-205ENST00000554207 FBXL6Q8N531 539 aa7.89□□□□□ -1.15
PSMA3-205ENST00000554207 NBPF4Q96M43 638 aa7.89□□□□□ -1.15
PSMA3-205ENST00000554207 KRTAP4-7Q9BYR0 210 aa7.89□□□□□ -1.15
PSMA3-205ENST00000554207 SNTG2Q9NY99 539 aa7.89□□□□□ -1.15
PSMA3-205ENST00000554207 STOML1Q9UBI4 398 aa7.89□□□□□ -1.15
PSMA3-205ENST00000554207 CDK11AQ9UQ88 783 aaPredicted RBP7.89□□□□□ -1.15
PSMA3-205ENST00000554207 KIAA1211LQ6NV74 962 aa7.88□□□□□ -1.15
PSMA3-205ENST00000554207 SRPK1Q96SB4 655 aaKnown RBP7.88□□□□□ -1.15
PSMA3-205ENST00000554207 SUCOQ9UBS9 1254 aaKnown RBP7.88□□□□□ -1.15
PSMA3-205ENST00000554207 ZNF214Q9UL59 606 aaPredicted RBP7.88□□□□□ -1.15
PSMA3-205ENST00000554207 RNF112Q9ULX5 631 aa7.88□□□□□ -1.15
PSMA3-205ENST00000554207 CEP131Q9UPN4 1083 aa7.88□□□□□ -1.15
PSMA3-205ENST00000554207 MSRB2Q9Y3D2 182 aa7.88□□□□□ -1.15
PSMA3-205ENST00000554207 U2SURPO15042 1029 aaKnown RBP7.87□□□□□ -1.15
PSMA3-205ENST00000554207 F13BP05160 661 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 FXNQ16595 210 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 GNPTABQ3T906 1256 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 DCAF15Q66K64 600 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 ZNF765Q7L2R6 523 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 FAM214BQ7L5A3 538 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 ZAR1Q86SH2 424 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 VWCEQ96DN2 955 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 HEXIM2Q96MH2 286 aaKnown RBP7.87□□□□□ -1.15
PSMA3-205ENST00000554207 KREMEN1Q96MU8 473 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 SIRPGQ9P1W8 387 aa7.87□□□□□ -1.15
PSMA3-205ENST00000554207 PRR33A8MZF0 331 aa7.86□□□□□ -1.15
PSMA3-205ENST00000554207 CLEC3AO75596 197 aa7.86□□□□□ -1.15
PSMA3-205ENST00000554207 CANXP27824 592 aaKnown RBP7.86□□□□□ -1.15
PSMA3-205ENST00000554207 PMS1P54277 932 aaKnown RBP7.86□□□□□ -1.15
PSMA3-205ENST00000554207 AXDND1Q5T1B0 1012 aaPredicted RBP7.86□□□□□ -1.15
PSMA3-205ENST00000554207 SOGA3Q5TF21 947 aa7.86□□□□□ -1.15
PSMA3-205ENST00000554207 DEPDC7Q96QD5 511 aa7.86□□□□□ -1.15
PSMA3-205ENST00000554207 LGR4Q9BXB1 951 aa7.86□□□□□ -1.15
PSMA3-205ENST00000554207 PHAXQ9H814 394 aaKnown RBP7.86□□□□□ -1.15
PSMA3-205ENST00000554207 TPX2Q9ULW0 747 aaKnown RBP7.86□□□□□ -1.15
PSMA3-205ENST00000554207 FSTP19883 344 aa7.85□□□□□ -1.15
PSMA3-205ENST00000554207 CCNFP41002 786 aa7.85□□□□□ -1.15
PSMA3-205ENST00000554207 SNW1Q13573 536 aaKnown RBP7.85□□□□□ -1.15
PSMA3-205ENST00000554207 NBPF12Q5TAG4 269 aaPredicted RBP7.85□□□□□ -1.15
PSMA3-205ENST00000554207 MKRN2Q9H000 416 aaKnown RBP7.85□□□□□ -1.15
PSMA3-205ENST00000554207 SLC12A7Q9Y666 1083 aa7.85□□□□□ -1.15
PSMA3-205ENST00000554207 SHOXO15266 292 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 CBFA2T2O43439 604 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 YBX3P16989 372 aaKnown RBP eCLIP7.84□□□□□ -1.15
PSMA3-205ENST00000554207 SLC7A5Q01650 507 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 LCE1DQ5T752 114 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 RNF43Q68DV7 783 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 OGFOD3Q6PK18 319 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 SPATC1Q76KD6 591 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 SLC51AQ86UW1 340 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 Q96M66 194 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 KANSL2Q9H9L4 492 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 SUSD2Q9UGT4 822 aa7.84□□□□□ -1.15
PSMA3-205ENST00000554207 CBX7O95931 251 aa7.83□□□□□ -1.16
PSMA3-205ENST00000554207 EPHX1P07099 455 aa7.83□□□□□ -1.16
PSMA3-205ENST00000554207 NFIAQ12857 509 aa7.83□□□□□ -1.16
PSMA3-205ENST00000554207 JAZF1Q86VZ6 243 aa7.83□□□□□ -1.16
PSMA3-205ENST00000554207 CCDC144CPQ8IYA2 1237 aa7.83□□□□□ -1.16
PSMA3-205ENST00000554207 FAM181AQ8N9Y4 354 aa7.83□□□□□ -1.16
PSMA3-205ENST00000554207 SHKBP1Q8TBC3 707 aa7.83□□□□□ -1.16
PSMA3-205ENST00000554207 FGD4Q96M96 766 aa7.83□□□□□ -1.16
PSMA3-205ENST00000554207 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.83□□□□□ -1.16
PSMA3-205ENST00000554207 MINPP1Q9UNW1 487 aa7.83□□□□□ -1.16
PSMA3-205ENST00000554207 WDR64B1ANS9 1081 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 PDPK1O15530 556 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 PAX4O43316 350 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 SUSD5O60279 629 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 TXKP42681 527 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 RNF141Q8WVD5 230 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 MKL1Q969V6 931 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 DNAJC7Q99615 494 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 HAUS7Q99871 368 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 PRDM5Q9NQX1 630 aaPredicted RBP7.82□□□□□ -1.16
PSMA3-205ENST00000554207 APEX2Q9UBZ4 518 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 PFDN2Q9UHV9 154 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 ZNF451Q9Y4E5 1061 aa7.82□□□□□ -1.16
PSMA3-205ENST00000554207 DIAPH1O60610 1272 aaKnown RBP7.81□□□□□ -1.16
PSMA3-205ENST00000554207 ETV3P41162 512 aa7.81□□□□□ -1.16
PSMA3-205ENST00000554207 MCTP1Q6DN14 999 aa7.81□□□□□ -1.16
PSMA3-205ENST00000554207 ZNF746Q6NUN9 644 aaPredicted RBP7.81□□□□□ -1.16
PSMA3-205ENST00000554207 MRFAP1L1Q96HT8 127 aa7.81□□□□□ -1.16
PSMA3-205ENST00000554207 DHRS1Q96LJ7 313 aa7.81□□□□□ -1.16
PSMA3-205ENST00000554207 CCDC113Q9H0I3 377 aa7.81□□□□□ -1.16
PSMA3-205ENST00000554207 NCAPHQ15003 741 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 NFE2L2Q16236 605 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 NBPF9Q3BBW0 867 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 SLC10A6Q3KNW5 377 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 SFRP5Q5T4F7 317 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 TMC3Q7Z5M5 1100 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 NOP9Q86U38 636 aaKnown RBP7.8□□□□□ -1.16
PSMA3-205ENST00000554207 LILRB2Q8N423 598 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 PRDM14Q9GZV8 571 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 KLHL25Q9H0H3 589 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 MRPL42Q9Y6G3 142 aaKnown RBP7.8□□□□□ -1.16
PSMA3-205ENST00000554207 CADPSQ9ULU8 1353 aa7.8□□□□□ -1.16
PSMA3-205ENST00000554207 SHISA3A0PJX4 238 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms