RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
IFT43-206ENST00000554026 NBPF3Q9H094 633 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 LOC285556D6RIA3 1793 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 USP17L15C9J2P7 530 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 USP17L13C9JLJ4 530 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 USP17L11C9JVI0 530 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 USP17L18D6R9N7 530 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 USP17L22D6RA61 530 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 USP17L17D6RBQ6 530 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 USP17L19D6RCP7 530 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 USP17L20D6RJB6 530 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 E7EWF7 191 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 WDR46O15213 610 aaKnown RBP13.28□□□□□ -0.28
IFT43-206ENST00000554026 SLC34A2O95436 690 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 IRX3P78415 501 aaPredicted RBP13.28□□□□□ -0.28
IFT43-206ENST00000554026 USP17L24Q0WX57 530 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 GPAT2Q6NUI2 795 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 DGKHQ86XP1 1220 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 ACER1Q8TDN7 264 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 UBAC1Q9BSL1 405 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 MTA3Q9BTC8 594 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 STX8Q9UNK0 236 aa13.28□□□□□ -0.28
IFT43-206ENST00000554026 TNRC18O15417 2968 aaPredicted RBP13.28□□□□□ -0.28
IFT43-206ENST00000554026 A0A1W2PRG0 241 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 ERICH2A1L162 156 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 SLC27A2O14975 620 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 TLR2O60603 784 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 KDM4AO75164 1064 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 TOP1P11387 765 aaKnown RBP13.27□□□□□ -0.29
IFT43-206ENST00000554026 GCLCP48506 637 aaPredicted RBP13.27□□□□□ -0.29
IFT43-206ENST00000554026 NOVP48745 357 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 DGKZQ13574 1117 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 ARHGEF6Q15052 776 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 ZYXQ15942 572 aaKnown RBP13.27□□□□□ -0.29
IFT43-206ENST00000554026 TSGA10IPQ3SY00 556 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 SIAH1Q8IUQ4 282 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 GMCL1P1Q8NEA9 526 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 SMCR8Q8TEV9 937 aaPredicted RBP13.27□□□□□ -0.29
IFT43-206ENST00000554026 INCENPQ9NQS7 918 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 NEDD4P46934 1319 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 PDE4DIPQ5VU43 2346 aa13.27□□□□□ -0.29
IFT43-206ENST00000554026 B4E1Z4 1266 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 F5H6K3 240 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
IFT43-206ENST00000554026 VCAM1P19320 739 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 RGS19P49795 217 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 KLRC3Q07444 240 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 CRHR2Q13324 411 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 MYPNQ86TC9 1320 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
IFT43-206ENST00000554026 IL17RBQ9NRM6 502 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 HOXC10Q9NYD6 342 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 ZSWIM5Q9P217 1185 aa13.26□□□□□ -0.29
IFT43-206ENST00000554026 TBC1D8O95759 1140 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 MCM5P33992 734 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 HSPA4P34932 840 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 TREML2Q5T2D2 321 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 RCSD1Q6JBY9 416 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 CATSPERGQ6ZRH7 1159 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 CLEC10AQ8IUN9 316 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 TMTC2Q8N394 836 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 ANKS1AQ92625 1134 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 GMCL1Q96IK5 515 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 ASCC2Q9H1I8 757 aaPredicted RBP13.25□□□□□ -0.29
IFT43-206ENST00000554026 RPAP3Q9H6T3 665 aaPredicted RBP13.25□□□□□ -0.29
IFT43-206ENST00000554026 TACC3Q9Y6A5 838 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 MYH4Q9Y623 1939 aa13.25□□□□□ -0.29
IFT43-206ENST00000554026 GPR25O00155 361 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 RAD21O60216 631 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 FKTNO75072 461 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 PSMA5P28066 241 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 COG2Q14746 738 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 KIF22Q14807 665 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 LBX2Q6XYB7 198 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 KCNB2Q92953 911 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 TMEM87BQ96K49 555 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 TANGO6Q9C0B7 1094 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 KAT14Q9H8E8 782 aa13.24□□□□□ -0.29
IFT43-206ENST00000554026 TNKSO95271 1327 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 WDR19Q8NEZ3 1342 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 NDUFB10O96000 172 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 FDX1P10109 184 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 HERVK_113P62684 666 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 SP3Q02447 781 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 IFIT1BQ5T764 474 aaKnown RBP13.23□□□□□ -0.29
IFT43-206ENST00000554026 SLFN13Q68D06 897 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 C17orf99Q6UX52 265 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 ERO1AQ96HE7 468 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 NEK1Q96PY6 1258 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 USP26Q9BXU7 913 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 FEM1BQ9UK73 627 aa13.23□□□□□ -0.29
IFT43-206ENST00000554026 ADGRA2Q96PE1 1338 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms