RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 STX10O60499 249 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 CALM1P0DP23 149 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 CALM2P0DP24 149 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 CALM3P0DP25 149 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 ERCC5P28715 1186 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-211ENST00000553882 RPS8P62241 208 aaKnown RBP16.56■□□□□ 0.24
ACTN1-211ENST00000553882 PTF1AQ7RTS3 328 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 FBXO33Q7Z6M2 555 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 SLC51AQ86UW1 340 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 TXNRD3Q86VQ6 643 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 MNS1Q8NEH6 495 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 FERMT2Q96AC1 680 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 CARD6Q9BX69 1037 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 SRP68Q9UHB9 627 aaKnown RBP16.56■□□□□ 0.24
ACTN1-211ENST00000553882 PARP3Q9Y6F1 533 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 MORC2Q9Y6X9 1032 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-211ENST00000553882 DDAH1O94760 285 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 TUBB4AP04350 444 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 FGRP09769 529 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 CDC25AP30304 524 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 DPYDQ12882 1025 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 KARSQ15046 597 aaKnown RBP16.56■□□□□ 0.24
ACTN1-211ENST00000553882 CRNKL1Q9BZJ0 848 aaKnown RBP16.56■□□□□ 0.24
ACTN1-211ENST00000553882 MTMR7Q9Y216 660 aa16.56■□□□□ 0.24
ACTN1-211ENST00000553882 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.56■□□□□ 0.24
ACTN1-211ENST00000553882 A0A1B0GTH6 734 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 SOWAHDA6NJG2 315 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 HIBADHP31937 336 aaKnown RBP16.55■□□□□ 0.24
ACTN1-211ENST00000553882 CUL4BQ13620 913 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 SMARCC1Q92922 1105 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-211ENST00000553882 SCG2P13521 617 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 SPATA1Q5VX52 437 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 APTXQ7Z2E3 356 aaKnown RBP16.55■□□□□ 0.24
ACTN1-211ENST00000553882 SH3RF1Q7Z6J0 888 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 CREBRFQ8IUR6 639 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 UBXN4Q92575 508 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 EPC1Q9H2F5 836 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 MCM9Q9NXL9 1143 aa16.55■□□□□ 0.24
ACTN1-211ENST00000553882 USP17L8P0C7I0 530 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 CLCN6P51797 869 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 ATP2C1P98194 919 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 IGSF22Q8N9C0 903 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 GPKOWQ92917 476 aaPredicted RBP eCLIP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 NOL10Q9BSC4 688 aaKnown RBP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 IRX2Q9BZI1 471 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 CTNND2Q9UQB3 1225 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 XDHP47989 1333 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 SPATA31A5Q5VU36 1347 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 SPATA31A7Q8IWB4 1347 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 H2AFXP16104 143 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 CCT6AP40227 531 aaKnown RBP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 RBL2Q08999 1139 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 FAM98CQ17RN3 349 aaKnown RBP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 NBPF5PQ86XG9 351 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 KRT222Q8N1A0 295 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 GTPBP4Q9BZE4 634 aaKnown RBP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 ST7Q9NRC1 585 aa16.54■□□□□ 0.24
ACTN1-211ENST00000553882 GOLGB1Q14789 3259 aaKnown RBP16.54■□□□□ 0.24
ACTN1-211ENST00000553882 RREB1Q92766 1687 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 PPP1R3GB7ZBB8 358 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 AKR1B15C9JRZ8 316 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-211ENST00000553882 BMP15O95972 392 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 PCP11498 1178 aaKnown RBP16.53■□□□□ 0.24
ACTN1-211ENST00000553882 IL17AQ16552 155 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 UTP14CQ5TAP6 766 aaKnown RBP16.53■□□□□ 0.24
ACTN1-211ENST00000553882 RASGRP4Q8TDF6 673 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 NLRP3Q96P20 1036 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 GSDMAQ96QA5 445 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 A0A1B0GUL6 1792 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 SCN7AQ01118 1682 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 A0A0U1RQJ8 604 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 ORC4O43929 436 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 CASQ1P31415 396 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 ATRIPQ8WXE1 791 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 MRPL44Q9H9J2 332 aaKnown RBP16.53■□□□□ 0.24
ACTN1-211ENST00000553882 LZTFL1Q9NQ48 299 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 MAPK8IP1Q9UQF2 711 aa16.53■□□□□ 0.24
ACTN1-211ENST00000553882 RCSD1Q6JBY9 416 aa16.52■□□□□ 0.24
ACTN1-211ENST00000553882 SETDB2Q96T68 719 aa16.52■□□□□ 0.24
ACTN1-211ENST00000553882 MTRQ99707 1265 aa16.52■□□□□ 0.24
ACTN1-211ENST00000553882 ADD3Q9UEY8 706 aaKnown RBP16.52■□□□□ 0.24
ACTN1-211ENST00000553882 PPFIBP1Q86W92 1011 aa16.52■□□□□ 0.23
ACTN1-211ENST00000553882 DZIP1Q86YF9 867 aaKnown RBP16.52■□□□□ 0.23
ACTN1-211ENST00000553882 IQUBQ8NA54 791 aa16.52■□□□□ 0.23
ACTN1-211ENST00000553882 DYNLL2Q96FJ2 89 aa16.52■□□□□ 0.23
ACTN1-211ENST00000553882 ATP8A2Q9NTI2 1148 aa16.52■□□□□ 0.23
ACTN1-211ENST00000553882 TADA3O75528 432 aa16.51■□□□□ 0.23
ACTN1-211ENST00000553882 E2F4Q16254 413 aa16.51■□□□□ 0.23
ACTN1-211ENST00000553882 PFKFB3Q16875 520 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-211ENST00000553882 CDKAL1Q5VV42 579 aa16.51■□□□□ 0.23
ACTN1-211ENST00000553882 RRAGBQ5VZM2 374 aa16.51■□□□□ 0.23
ACTN1-211ENST00000553882 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
ACTN1-211ENST00000553882 FAM205AQ6ZU69 1335 aa16.51■□□□□ 0.23
ACTN1-211ENST00000553882 SEMA3EO15041 775 aa16.51■□□□□ 0.23
ACTN1-211ENST00000553882 TFAP4Q01664 338 aa16.51■□□□□ 0.23
ACTN1-211ENST00000553882 RAD9BQ6WBX8 426 aa16.51■□□□□ 0.23
ACTN1-211ENST00000553882 ARPP21Q9UBL0 812 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-211ENST00000553882 COL22A1Q8NFW1 1626 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-211ENST00000553882 CASP14P31944 242 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms