RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 ZFYVE28Q9HCC9 887 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 DCP1AQ9NPI6 582 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-209ENST00000553855 ARPP21Q9UBL0 812 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-209ENST00000553855 SWAP70Q9UH65 585 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 THSD7BQ9C0I4 1608 aa9.96□□□□□ -0.81
PSEN1-209ENST00000553855 HIP1O00291 1037 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 MPHOSPH10O00566 681 aaKnown RBP9.96□□□□□ -0.82
PSEN1-209ENST00000553855 GPAA1O43292 621 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 TBC1D8O95759 1140 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 SLC3A2P08195 630 aaKnown RBP9.96□□□□□ -0.82
PSEN1-209ENST00000553855 PTPRAP18433 802 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 PTPREP23469 700 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 GJA5P36382 358 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 ARHGEF6Q15052 776 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 TAF1CQ15572 869 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-209ENST00000553855 CERKLQ49MI3 558 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-209ENST00000553855 GIMAP6Q6P9H5 292 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 GADL1Q6ZQY3 521 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 NUDT18Q6ZVK8 323 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 PUS7LQ9H0K6 701 aaKnown RBP9.96□□□□□ -0.82
PSEN1-209ENST00000553855 OSBPL3Q9H4L5 887 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 ZCCHC17Q9NP64 241 aaKnown RBP9.96□□□□□ -0.82
PSEN1-209ENST00000553855 DIAPH3Q9NSV4 1193 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 TMOD4Q9NZQ9 345 aa9.96□□□□□ -0.82
PSEN1-209ENST00000553855 TRIM75PA6NK02 468 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 DDX11L8A8MPP1 907 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 PATL2C9JE40 543 aaKnown RBP9.95□□□□□ -0.82
PSEN1-209ENST00000553855 PRKAB2O43741 272 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 PABPC4Q13310 644 aaKnown RBP eCLIP9.95□□□□□ -0.82
PSEN1-209ENST00000553855 ABCB5Q2M3G0 1257 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 CENPQQ7L2Z9 268 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-209ENST00000553855 PLEKHM2Q8IWE5 1019 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 BRI3BPQ8WY22 251 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 OSBP2Q969R2 916 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 CCDC97Q96F63 343 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-209ENST00000553855 CCDC136Q96JN2 1154 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 STRBPQ96SI9 672 aaKnown RBP9.95□□□□□ -0.82
PSEN1-209ENST00000553855 KCNK17Q96T54 332 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 FEZ1Q99689 392 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 NAPBQ9H115 298 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 HELLSQ9NRZ9 838 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 KCNH4Q9UQ05 1017 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 SALL3Q9BXA9 1300 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 DOCK2Q92608 1830 aa9.95□□□□□ -0.82
PSEN1-209ENST00000553855 MINDY4BA8MYZ0 360 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 USP17L12C9JPN9 530 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 USP17L21D6R901 530 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 C3orf80F5H4A9 247 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 IGF2BP3O00425 579 aaKnown RBP eCLIP9.94□□□□□ -0.82
PSEN1-209ENST00000553855 FKTNO75072 461 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 GDF11O95390 407 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 PDIA4P13667 645 aaKnown RBP9.94□□□□□ -0.82
PSEN1-209ENST00000553855 PLCD1P51178 756 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 SPP2Q13103 211 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 KIF22Q14807 665 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 RAB3GAP1Q15042 981 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 SLFNL1Q499Z3 407 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 ZMYM1Q5SVZ6 1142 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 ANKRD23Q86SG2 305 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 METTL16Q86W50 562 aaKnown RBP9.94□□□□□ -0.82
PSEN1-209ENST00000553855 ZNF280CQ8ND82 737 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 TATDN2Q93075 761 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 PARK7Q99497 189 aaKnown RBP9.94□□□□□ -0.82
PSEN1-209ENST00000553855 TMEM134Q9H6X4 195 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 MKNK2Q9HBH9 465 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 PNMA3Q9UL41 463 aa9.94□□□□□ -0.82
PSEN1-209ENST00000553855 MOXD2PA6NHM9 499 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 C19orf81C9J6K1 198 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 BTBD19C9JJ37 291 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 USP17L10C9JJH3 530 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 M0R2C6 588 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 GPR25O00155 361 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 PDHXO00330 501 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 GH2P01242 217 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 USP14P54578 494 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 NOM1Q5C9Z4 860 aaKnown RBP9.93□□□□□ -0.82
PSEN1-209ENST00000553855 PACS2Q86VP3 889 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 RUFY2Q8WXA3 655 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 ERO1AQ96HE7 468 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 CCDC17Q96LX7 622 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 CFHR5Q9BXR6 569 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 SH2D4AQ9H788 454 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 ZBTB21Q9ULJ3 1066 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 AFG3L2Q9Y4W6 797 aa9.93□□□□□ -0.82
PSEN1-209ENST00000553855 A0A0G2JLL6 359 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-209ENST00000553855 CHGBP05060 677 aa9.92□□□□□ -0.82
PSEN1-209ENST00000553855 SLURP2P0DP57 97 aa9.92□□□□□ -0.82
PSEN1-209ENST00000553855 SDSP20132 328 aa9.92□□□□□ -0.82
PSEN1-209ENST00000553855 PSEN2P49810 448 aa9.92□□□□□ -0.82
PSEN1-209ENST00000553855 LSM11P83369 360 aaKnown RBP eCLIP9.92□□□□□ -0.82
PSEN1-209ENST00000553855 PDE4BQ07343 736 aa9.92□□□□□ -0.82
PSEN1-209ENST00000553855 CRHR2Q13324 411 aa9.92□□□□□ -0.82
PSEN1-209ENST00000553855 SBK1Q52WX2 424 aa9.92□□□□□ -0.82
PSEN1-209ENST00000553855 C12orf60Q5U649 245 aa9.92□□□□□ -0.82
PSEN1-209ENST00000553855 TATDN1Q6P1N9 297 aa9.92□□□□□ -0.82
PSEN1-209ENST00000553855 CTR9Q6PD62 1173 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms