RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 SDR42E1Q8WUS8 393 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 LBHD1Q9BQE6 289 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-210ENST00000553779 RIOK1Q9BRS2 568 aaKnown RBP11.95□□□□□ -0.5
ACTN1-210ENST00000553779 PRO3102Q9H379 93 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 PAG1Q9NWQ8 432 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 SWAP70Q9UH65 585 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 A0A0C4DFX4 3053 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 PFASO15067 1338 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 KBTBD13C9JR72 458 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 SOX1O00570 391 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-210ENST00000553779 FLOT1O75955 427 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 MBD4O95243 580 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 PTPREP23469 700 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 ICA1Q05084 483 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 NCAPG2Q86XI2 1143 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 TDHQ8IZJ6 230 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 LCORLQ8N3X6 602 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-210ENST00000553779 ARMT1Q9H993 441 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
ACTN1-210ENST00000553779 LTBP2Q14767 1821 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 RAB11FIP3O75154 756 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 CNMDO75829 334 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 BMP8BP34820 402 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 ATN1P54259 1190 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-210ENST00000553779 MDM2Q00987 491 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-210ENST00000553779 GRB14Q14449 540 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 COG2Q14746 738 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-210ENST00000553779 SPICE1Q8N0Z3 855 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 DEFB123Q8N688 67 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.93□□□□□ -0.5
ACTN1-210ENST00000553779 USP6NLQ92738 828 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 GDF15Q99988 308 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 BTBD7Q9P203 1132 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 DDX20Q9UHI6 824 aaKnown RBP11.93□□□□□ -0.5
ACTN1-210ENST00000553779 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
ACTN1-210ENST00000553779 CYP2D6P10635 497 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 ADORA2AP29274 412 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 CYP2C19P33261 490 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 LRRC26Q2I0M4 334 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 LBX2Q6XYB7 198 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 SLC44A5Q8NCS7 719 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 LPAR1Q92633 364 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 DYNLL2Q96FJ2 89 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 SPATC1LQ9H0A9 340 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 DCP1AQ9NPI6 582 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-210ENST00000553779 FLRT1Q9NZU1 646 aa11.92□□□□□ -0.5
ACTN1-210ENST00000553779 STRNO43815 780 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 ERCC3P19447 782 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 GUCY1A2P33402 732 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-210ENST00000553779 LHX8Q68G74 356 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 CLEC10AQ8IUN9 316 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 ARRDC4Q8NCT1 418 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 MOV10L1Q9BXT6 1211 aaKnown RBP11.91□□□□□ -0.5
ACTN1-210ENST00000553779 MROH8Q9H579 483 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 GOPCQ9HD26 462 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-210ENST00000553779 ATP8A2Q9NTI2 1148 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 ATP11BQ9Y2G3 1177 aa11.91□□□□□ -0.5
ACTN1-210ENST00000553779 CTDP1Q9Y5B0 961 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-210ENST00000553779 DNM1LO00429 736 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 WDR46O15213 610 aaKnown RBP11.9□□□□□ -0.5
ACTN1-210ENST00000553779 COL6A1P12109 1028 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 FCER1AP12319 257 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 AKR1B1P15121 316 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 ADD2P35612 726 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 EVX2Q03828 476 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 GABPAQ06546 454 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 GJC2Q5T442 439 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-210ENST00000553779 ANO1Q5XXA6 986 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 NPLOC4Q8TAT6 608 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 CCDC17Q96LX7 622 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 ISY1Q9ULR0 285 aaKnown RBP11.9□□□□□ -0.5
ACTN1-210ENST00000553779 SLC4A4Q9Y6R1 1079 aa11.9□□□□□ -0.5
ACTN1-210ENST00000553779 A0A1W2PRG0 241 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 TCRBV5S4A2TA0A5A2 114 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 PRKAB2O43741 272 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 HOXC6P09630 235 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 ATP5JP18859 108 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 DSG3P32926 999 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 RTP1P59025 263 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 KCTD2Q14681 263 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 Q7L0L9 218 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 ATG4CQ96DT6 458 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 MMP19Q99542 508 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 LRRCC1Q9C099 1032 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 VCPKMTQ9H867 229 aa11.89□□□□□ -0.51
ACTN1-210ENST00000553779 GREB1LQ9C091 1923 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-210ENST00000553779 CYP2D7A0A087X1C5 515 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 USP17L12C9JPN9 530 aa11.88□□□□□ -0.51
ACTN1-210ENST00000553779 USP17L21D6R901 530 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms