RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 GABRQQ9UN88 632 aa12.16□□□□□ -0.46
HNRNPC-208ENST00000553753 PEX10O60683 326 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 FLT3LGP49771 235 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 KIAA1755Q5JYT7 1200 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 ZNF589Q86UQ0 364 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 SH3TC2Q8TF17 1288 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 VCPKMTQ9H867 229 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 DOCK3Q8IZD9 2030 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 FGAP02671 866 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 HSPD1P10809 573 aaKnown RBP12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 GRK4P32298 578 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 MFAP1P55081 439 aaKnown RBP12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 ERVK-9P63128 1117 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 ERVK-24P63145 666 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 COG2Q14746 738 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 ALX1Q15699 326 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 Q3C1V9 767 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 LBX2Q6XYB7 198 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 PAGR1Q9BTK6 254 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 TANGO6Q9C0B7 1094 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 HOXC10Q9NYD6 342 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
HNRNPC-208ENST00000553753 CCDC171Q6TFL3 1326 aa12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 TNRC18O15417 2968 aaPredicted RBP12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 HIP1O00291 1037 aa12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 MLLT1Q03111 559 aaPredicted RBP12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 IRF5Q13568 498 aa12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 CWC27Q6UX04 472 aaKnown RBP12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 DIAPH3Q9NSV4 1193 aa12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 NYAP2Q9P242 653 aa12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 ANAPC4Q9UJX5 808 aa12.14□□□□□ -0.47
HNRNPC-208ENST00000553753 SPDYE16A6NNV3 312 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 TSPY3P0CV98 308 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 TSPY8P0CW00 308 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 MAPK4P31152 587 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 TTC22Q5TAA0 569 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 CCAR1Q8IX12 1150 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 GREB1LQ9C091 1923 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 IGKV6D-41A0A0C4DH26 115 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 RAD21O60216 631 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 ADCY3O60266 1144 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 FLOT1O75955 427 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 MYCP01106 439 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 GSPT1P15170 499 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 CCNA1P78396 465 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 TFAP4Q01664 338 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 NEDD1Q8NHV4 660 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 CEP95Q96GE4 821 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 PORCNQ9H237 461 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 MTMR4Q9NYA4 1195 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 BIN2Q9UBW5 565 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 CLIP2Q9UDT6 1046 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 GJD2Q9UKL4 321 aa12.13□□□□□ -0.47
HNRNPC-208ENST00000553753 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
HNRNPC-208ENST00000553753 CNMDO75829 334 aa12.12□□□□□ -0.47
HNRNPC-208ENST00000553753 TTLL1O95922 423 aa12.12□□□□□ -0.47
HNRNPC-208ENST00000553753 MKL1Q969V6 931 aa12.12□□□□□ -0.47
HNRNPC-208ENST00000553753 INCENPQ9NQS7 918 aa12.12□□□□□ -0.47
HNRNPC-208ENST00000553753 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
HNRNPC-208ENST00000553753 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
HNRNPC-208ENST00000553753 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
HNRNPC-208ENST00000553753 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 F5H6K3 240 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 FGRP09769 529 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 ELNP15502 786 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 DSG3P32926 999 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 UBXN2AP68543 259 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 KLRC3Q07444 240 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 GPR142Q7Z601 462 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 MB21D1Q8N884 522 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 NUDT12Q9BQG2 462 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 SYNPO2Q9UMS6 1093 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 PLIN4Q96Q06 1357 aa12.11□□□□□ -0.47
HNRNPC-208ENST00000553753 ORC4O43929 436 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 MTFR1Q15390 333 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 SOCS4Q8WXH5 440 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 CWC22Q9HCG8 908 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 RLFQ13129 1914 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 NDUFB10O96000 172 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 EN2P19622 333 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 HAND2P61296 217 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 PLEKHH3Q7Z736 793 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 ATG4CQ96DT6 458 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 TOMM22Q9NS69 142 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 FBXO28Q9NVF7 368 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 TACC3Q9Y6A5 838 aa12.1□□□□□ -0.47
HNRNPC-208ENST00000553753 ZNF213O14771 459 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms