RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 USP17L15C9J2P7 530 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 USP17L13C9JLJ4 530 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 USP17L11C9JVI0 530 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 USP17L18D6R9N7 530 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 USP17L22D6RA61 530 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 USP17L17D6RBQ6 530 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 USP17L19D6RCP7 530 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 USP17L20D6RJB6 530 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 RANBP6O60518 1105 aaKnown RBP14.06□□□□□ -0.16
TMEM253-202ENST00000553744 CDC45O75419 566 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 TTLL1O95922 423 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 USP17L24Q0WX57 530 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 RRP12Q5JTH9 1297 aaKnown RBP14.06□□□□□ -0.16
TMEM253-202ENST00000553744 KIAA1755Q5JYT7 1200 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 MFSD6Q6ZSS7 791 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 RPAP3Q9H6T3 665 aaPredicted RBP14.06□□□□□ -0.16
TMEM253-202ENST00000553744 GOPCQ9HD26 462 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 TOMM22Q9NS69 142 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 NEDD4P46934 1319 aa14.06□□□□□ -0.16
TMEM253-202ENST00000553744 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
TMEM253-202ENST00000553744 GCLCP48506 637 aaPredicted RBP14.05□□□□□ -0.16
TMEM253-202ENST00000553744 HERVK_113P62684 666 aa14.05□□□□□ -0.16
TMEM253-202ENST00000553744 LACTBP83111 547 aaPredicted RBP14.05□□□□□ -0.16
TMEM253-202ENST00000553744 CAP1Q01518 475 aa14.05□□□□□ -0.16
TMEM253-202ENST00000553744 FAM110CQ1W6H9 321 aa14.05□□□□□ -0.16
TMEM253-202ENST00000553744 PPP4R3BQ5MIZ7 849 aa14.05□□□□□ -0.16
TMEM253-202ENST00000553744 CASC1Q6TDU7 716 aa14.05□□□□□ -0.16
TMEM253-202ENST00000553744 CATSPERGQ6ZRH7 1159 aa14.05□□□□□ -0.16
TMEM253-202ENST00000553744 SPICE1Q8N0Z3 855 aa14.05□□□□□ -0.16
TMEM253-202ENST00000553744 P2RX7Q99572 595 aaKnown RBP14.05□□□□□ -0.16
TMEM253-202ENST00000553744 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
TMEM253-202ENST00000553744 SYNPO2Q9UMS6 1093 aa14.05□□□□□ -0.16
TMEM253-202ENST00000553744 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
TMEM253-202ENST00000553744 NT5C2P49902 561 aa14.04□□□□□ -0.16
TMEM253-202ENST00000553744 KIF22Q14807 665 aa14.04□□□□□ -0.16
TMEM253-202ENST00000553744 KIAA1211Q6ZU35 1233 aa14.04□□□□□ -0.16
TMEM253-202ENST00000553744 OTOP1Q7RTM1 612 aa14.04□□□□□ -0.16
TMEM253-202ENST00000553744 LRRC47Q8N1G4 583 aaKnown RBP14.04□□□□□ -0.16
TMEM253-202ENST00000553744 ANKRD13CQ8N6S4 541 aa14.04□□□□□ -0.16
TMEM253-202ENST00000553744 GTF3C2Q8WUA4 911 aaPredicted RBP14.04□□□□□ -0.16
TMEM253-202ENST00000553744 MAP4K1Q92918 833 aa14.04□□□□□ -0.16
TMEM253-202ENST00000553744 MKL1Q969V6 931 aa14.04□□□□□ -0.16
TMEM253-202ENST00000553744 TANGO6Q9C0B7 1094 aa14.04□□□□□ -0.16
TMEM253-202ENST00000553744 LSG1Q9H089 658 aaKnown RBP14.04□□□□□ -0.16
TMEM253-202ENST00000553744 IL17RBQ9NRM6 502 aa14.04□□□□□ -0.16
TMEM253-202ENST00000553744 NMT2O60551 498 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 CYP21A2P08686 494 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 NOVP48745 357 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 LBX2Q6XYB7 198 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 GMCL1P1Q8NEA9 526 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 NKX2-3Q8TAU0 364 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 ESR2Q92731 530 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 ARHGAP39Q9C0H5 1083 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 EFCC1Q9HA90 598 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 MORF4L1Q9UBU8 362 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 STX8Q9UNK0 236 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 TRIM17Q9Y577 477 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 RBM8AQ9Y5S9 174 aaKnown RBP14.03□□□□□ -0.16
TMEM253-202ENST00000553744 ZSWIM8A7E2V4 1837 aa14.03□□□□□ -0.16
TMEM253-202ENST00000553744 MYH4Q9Y623 1939 aa14.02□□□□□ -0.16
TMEM253-202ENST00000553744 SPDYE16A6NNV3 312 aaPredicted RBP14.02□□□□□ -0.17
TMEM253-202ENST00000553744 F5H6K3 240 aa14.02□□□□□ -0.17
TMEM253-202ENST00000553744 RAD21O60216 631 aa14.02□□□□□ -0.17
TMEM253-202ENST00000553744 NDUFB10O96000 172 aa14.02□□□□□ -0.17
TMEM253-202ENST00000553744 CTGFP29279 349 aa14.02□□□□□ -0.17
TMEM253-202ENST00000553744 KLRC3Q07444 240 aa14.02□□□□□ -0.17
TMEM253-202ENST00000553744 ARHGEF6Q15052 776 aa14.02□□□□□ -0.17
TMEM253-202ENST00000553744 PKN2Q16513 984 aaKnown RBP14.02□□□□□ -0.17
TMEM253-202ENST00000553744 CNNM2Q9H8M5 875 aa14.02□□□□□ -0.17
TMEM253-202ENST00000553744 TXNRD2Q9NNW7 524 aa14.02□□□□□ -0.17
TMEM253-202ENST00000553744 ANO2Q9NQ90 1003 aa14.02□□□□□ -0.17
TMEM253-202ENST00000553744 A0A0G2JMZ2 1700 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 MYPNQ86TC9 1320 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 B4E1Z4 1266 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 KDM4AO75164 1064 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 FLOT1O75955 427 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 GNRH1P01148 92 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 PSMC4P43686 418 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 FCGRTP55899 365 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 COG2Q14746 738 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 FAM83BQ5T0W9 1011 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 POTEEQ6S8J3 1075 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 TRIM47Q96LD4 638 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 PAGR1Q9BTK6 254 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 KRT23Q9C075 422 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 RBPJLQ9UBG7 517 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 RABGAP1Q9Y3P9 1069 aa14.01□□□□□ -0.17
TMEM253-202ENST00000553744 RLFQ13129 1914 aa14□□□□□ -0.17
TMEM253-202ENST00000553744 CNMDO75829 334 aa14□□□□□ -0.17
TMEM253-202ENST00000553744 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
TMEM253-202ENST00000553744 FMNL1O95466 1100 aaPredicted RBP14□□□□□ -0.17
TMEM253-202ENST00000553744 DSG3P32926 999 aa14□□□□□ -0.17
TMEM253-202ENST00000553744 ERVK-9P63128 1117 aa14□□□□□ -0.17
TMEM253-202ENST00000553744 ERVK-24P63145 666 aa14□□□□□ -0.17
TMEM253-202ENST00000553744 FBXO46Q6PJ61 603 aaPredicted RBP14□□□□□ -0.17
TMEM253-202ENST00000553744 IQCA1Q86XH1 822 aa14□□□□□ -0.17
TMEM253-202ENST00000553744 GPRC5AQ8NFJ5 357 aa14□□□□□ -0.17
TMEM253-202ENST00000553744 NUP88Q99567 741 aaPredicted RBP14□□□□□ -0.17
TMEM253-202ENST00000553744 HOXC10Q9NYD6 342 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms