RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 A0A1W2PQ45 241 aaPredicted RBP17■□□□□ 0.31
PRPF39-204ENST00000553605 A0A1W2PQY0 241 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 XIRP2A4UGR9 3374 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 DCDC2CA8MYV0 355 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 TIMP1P01033 207 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 HLA-DOAP06340 250 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 RARBP10826 455 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 PPP4CP60510 307 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 TFCP2Q12800 502 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 ANKRD33Q7Z3H0 272 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 TOX2Q96NM4 488 aa17■□□□□ 0.31
PRPF39-204ENST00000553605 RPAP3Q9H6T3 665 aaPredicted RBP17■□□□□ 0.31
PRPF39-204ENST00000553605 CXXC1Q9P0U4 656 aaPredicted RBP17■□□□□ 0.31
PRPF39-204ENST00000553605 SAP30BPQ9UHR5 308 aaKnown RBP17■□□□□ 0.31
PRPF39-204ENST00000553605 PGK1P00558 417 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 ERCC3P19447 782 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 TMEM240Q5SV17 173 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 NAA16Q6N069 864 aaPredicted RBP16.99■□□□□ 0.31
PRPF39-204ENST00000553605 MFSD5Q6N075 450 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 CCDC174Q6PII3 467 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 C16orf59Q7L2K0 433 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 ACER1Q8TDN7 264 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 CHD9Q3L8U1 2897 aa16.99■□□□□ 0.31
PRPF39-204ENST00000553605 RASIP1Q5U651 963 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 SHCBP1Q8NEM2 672 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 MAML3Q96JK9 1138 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 SPATC1LQ9H0A9 340 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 EPHX3Q9H6B9 360 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 HOXC10Q9NYD6 342 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 MSRAQ9UJ68 235 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 PLXNA1Q9UIW2 1896 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 TCF20Q9UGU0 1960 aaKnown RBP16.98■□□□□ 0.31
PRPF39-204ENST00000553605 ZNF236Q9UL36 1845 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 MYO9BQ13459 2157 aa16.98■□□□□ 0.31
PRPF39-204ENST00000553605 ARID4AP29374 1257 aaPredicted RBP16.97■□□□□ 0.31
PRPF39-204ENST00000553605 PPIGQ13427 754 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRPF39-204ENST00000553605 COG2Q14746 738 aa16.97■□□□□ 0.31
PRPF39-204ENST00000553605 AAK1Q2M2I8 961 aa16.97■□□□□ 0.31
PRPF39-204ENST00000553605 NRBP1Q9UHY1 535 aa16.97■□□□□ 0.31
PRPF39-204ENST00000553605 MCAMP43121 646 aa16.96■□□□□ 0.31
PRPF39-204ENST00000553605 TFF2Q03403 129 aa16.96■□□□□ 0.31
PRPF39-204ENST00000553605 RAB30Q15771 203 aa16.96■□□□□ 0.31
PRPF39-204ENST00000553605 ABRAQ8N0Z2 381 aa16.96■□□□□ 0.31
PRPF39-204ENST00000553605 SSH1Q8WYL5 1049 aa16.96■□□□□ 0.31
PRPF39-204ENST00000553605 MROH8Q9H579 483 aa16.96■□□□□ 0.31
PRPF39-204ENST00000553605 STARD7Q9NQZ5 370 aa16.96■□□□□ 0.31
PRPF39-204ENST00000553605 HDAC5Q9UQL6 1122 aa16.96■□□□□ 0.31
PRPF39-204ENST00000553605 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.96■□□□□ 0.31
PRPF39-204ENST00000553605 ABCB5Q2M3G0 1257 aa16.95■□□□□ 0.3
PRPF39-204ENST00000553605 CERKLQ49MI3 558 aaPredicted RBP16.95■□□□□ 0.3
PRPF39-204ENST00000553605 TMEM31Q5JXX7 168 aa16.95■□□□□ 0.3
PRPF39-204ENST00000553605 ZNF365Q70YC5 407 aa16.95■□□□□ 0.3
PRPF39-204ENST00000553605 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
PRPF39-204ENST00000553605 NCAPG2Q86XI2 1143 aa16.95■□□□□ 0.3
PRPF39-204ENST00000553605 NUP133Q8WUM0 1156 aa16.95■□□□□ 0.3
PRPF39-204ENST00000553605 TSEN34Q9BSV6 310 aaKnown RBP16.95■□□□□ 0.3
PRPF39-204ENST00000553605 SLC28A3Q9HAS3 691 aa16.95■□□□□ 0.3
PRPF39-204ENST00000553605 TBX21Q9UL17 535 aa16.95■□□□□ 0.3
PRPF39-204ENST00000553605 SMCHD1A6NHR9 2005 aa16.95■□□□□ 0.3
PRPF39-204ENST00000553605 ACRP10323 421 aa16.94■□□□□ 0.3
PRPF39-204ENST00000553605 CSF2RAP15509 400 aa16.94■□□□□ 0.3
PRPF39-204ENST00000553605 KCNQ1P51787 676 aa16.94■□□□□ 0.3
PRPF39-204ENST00000553605 ACLYP53396 1101 aa16.94■□□□□ 0.3
PRPF39-204ENST00000553605 PLS1Q14651 629 aa16.94■□□□□ 0.3
PRPF39-204ENST00000553605 TMEM199Q8N511 208 aa16.94■□□□□ 0.3
PRPF39-204ENST00000553605 NKX2-4Q9H2Z4 354 aa16.94■□□□□ 0.3
PRPF39-204ENST00000553605 CABP5Q9NP86 173 aa16.94■□□□□ 0.3
PRPF39-204ENST00000553605 REV3LO60673 3130 aa16.94■□□□□ 0.3
PRPF39-204ENST00000553605 ADAMTS4O75173 837 aa16.93■□□□□ 0.3
PRPF39-204ENST00000553605 UQCRFS1P1P0C7P4 283 aa16.93■□□□□ 0.3
PRPF39-204ENST00000553605 FCER1AP12319 257 aa16.93■□□□□ 0.3
PRPF39-204ENST00000553605 PSRC1Q6PGN9 363 aaPredicted RBP16.93■□□□□ 0.3
PRPF39-204ENST00000553605 ALYREFQ86V81 257 aaKnown RBP16.93■□□□□ 0.3
PRPF39-204ENST00000553605 MICALL1Q8N3F8 863 aa16.93■□□□□ 0.3
PRPF39-204ENST00000553605 SERPINB13Q9UIV8 391 aa16.93■□□□□ 0.3
PRPF39-204ENST00000553605 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
PRPF39-204ENST00000553605 FOCADQ5VW36 1801 aa16.92■□□□□ 0.3
PRPF39-204ENST00000553605 AKR1A1P14550 325 aa16.92■□□□□ 0.3
PRPF39-204ENST00000553605 TAL1P17542 331 aaPredicted RBP16.92■□□□□ 0.3
PRPF39-204ENST00000553605 MB21D1Q8N884 522 aa16.92■□□□□ 0.3
PRPF39-204ENST00000553605 TINF2Q9BSI4 451 aa16.92■□□□□ 0.3
PRPF39-204ENST00000553605 TANGO6Q9C0B7 1094 aa16.92■□□□□ 0.3
PRPF39-204ENST00000553605 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
PRPF39-204ENST00000553605 SNRKQ9NRH2 765 aa16.92■□□□□ 0.3
PRPF39-204ENST00000553605 MROH7Q68CQ1 1323 aa16.92■□□□□ 0.3
PRPF39-204ENST00000553605 CHD7Q9P2D1 2997 aa16.92■□□□□ 0.3
PRPF39-204ENST00000553605 MOXD2PA6NHM9 499 aa16.91■□□□□ 0.3
PRPF39-204ENST00000553605 ERC2O15083 957 aa16.91■□□□□ 0.3
PRPF39-204ENST00000553605 ZNF865P0CJ78 1059 aaPredicted RBP16.91■□□□□ 0.3
PRPF39-204ENST00000553605 DYNLL1P63167 89 aaKnown RBP16.91■□□□□ 0.3
PRPF39-204ENST00000553605 SKIV2LQ15477 1246 aaKnown RBP16.91■□□□□ 0.3
PRPF39-204ENST00000553605 KCNA10Q16322 511 aa16.91■□□□□ 0.3
PRPF39-204ENST00000553605 HERVK_113Q902F9 699 aa16.91■□□□□ 0.3
PRPF39-204ENST00000553605 LENG1Q96BZ8 264 aaPredicted RBP16.91■□□□□ 0.3
PRPF39-204ENST00000553605 EHD4Q9H223 541 aa16.91■□□□□ 0.3
PRPF39-204ENST00000553605 YBX2Q9Y2T7 364 aaKnown RBP16.91■□□□□ 0.3
PRPF39-204ENST00000553605 APBB1O00213 710 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms