RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 BADQ92934 168 aa14.35□□□□□ -0.11
SRP54-203ENST00000553544 PRDM5Q9NQX1 630 aaPredicted RBP14.35□□□□□ -0.11
SRP54-203ENST00000553544 BTBD7Q9P203 1132 aa14.35□□□□□ -0.11
SRP54-203ENST00000553544 SERPINB13Q9UIV8 391 aa14.35□□□□□ -0.11
SRP54-203ENST00000553544 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
SRP54-203ENST00000553544 CYBAP13498 195 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 VCAM1P19320 739 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 CYP7A1P22680 504 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 ZAP70P43403 619 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 USP5P45974 858 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 DYNLL1P63167 89 aaKnown RBP14.34□□□□□ -0.11
SRP54-203ENST00000553544 COG2Q14746 738 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 ABCB5Q2M3G0 1257 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 OLFML2BQ68BL8 750 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 ACER1Q8TDN7 264 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 MYLIPQ8WY64 445 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 SLC5A4Q9NY91 659 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 EYSQ5T1H1 3165 aa14.34□□□□□ -0.11
SRP54-203ENST00000553544 SEPT4O43236 478 aa14.33□□□□□ -0.12
SRP54-203ENST00000553544 HMMRO75330 724 aa14.33□□□□□ -0.12
SRP54-203ENST00000553544 IGHA2P01877 340 aa14.33□□□□□ -0.12
SRP54-203ENST00000553544 EHD4Q9H223 541 aa14.33□□□□□ -0.12
SRP54-203ENST00000553544 RPAP3Q9H6T3 665 aaPredicted RBP14.33□□□□□ -0.12
SRP54-203ENST00000553544 MYH7P12883 1935 aa14.33□□□□□ -0.12
SRP54-203ENST00000553544 TTC28Q96AY4 2481 aa14.33□□□□□ -0.12
SRP54-203ENST00000553544 SIPA1L1O43166 1804 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 SPDYE16A6NNV3 312 aaPredicted RBP14.32□□□□□ -0.12
SRP54-203ENST00000553544 FOSL2P15408 326 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 ADORA2AP29274 412 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 ADCYAP1R1P41586 468 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 SNX17Q15036 470 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 TRIM60Q495X7 471 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 C1orf53Q5VUE5 145 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 AACSQ86V21 672 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 KIF1BPQ96EK5 621 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 MOV10L1Q9BXT6 1211 aaKnown RBP14.32□□□□□ -0.12
SRP54-203ENST00000553544 TTYH1Q9H313 450 aaPredicted RBP14.32□□□□□ -0.12
SRP54-203ENST00000553544 IL1RAPL2Q9NP60 686 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 PIH1D3Q9NQM4 214 aaKnown RBP14.32□□□□□ -0.12
SRP54-203ENST00000553544 TACC3Q9Y6A5 838 aa14.32□□□□□ -0.12
SRP54-203ENST00000553544 TRIM43BA6NCK2 446 aa14.31□□□□□ -0.12
SRP54-203ENST00000553544 RAB11FIP3O75154 756 aa14.31□□□□□ -0.12
SRP54-203ENST00000553544 ANO1Q5XXA6 986 aa14.31□□□□□ -0.12
SRP54-203ENST00000553544 FERMT2Q96AC1 680 aa14.31□□□□□ -0.12
SRP54-203ENST00000553544 TRIM43Q96BQ3 446 aaPredicted RBP14.31□□□□□ -0.12
SRP54-203ENST00000553544 MYH1P12882 1939 aa14.31□□□□□ -0.12
SRP54-203ENST00000553544 TMEM265A0A087WTH1 108 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 IDH1O75874 414 aaKnown RBP14.3□□□□□ -0.12
SRP54-203ENST00000553544 TLE2Q04725 743 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 LRRC41Q15345 812 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 PRAMEF19Q5SWL8 479 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 SH3RF1Q7Z6J0 888 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 CLASRPQ8N2M8 674 aaKnown RBP14.3□□□□□ -0.12
SRP54-203ENST00000553544 MIGA1Q8NAN2 632 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 SHCBP1Q8NEM2 672 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 SPATC1LQ9H0A9 340 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 MROH8Q9H579 483 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 ANTXR1Q9H6X2 564 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 PDLIM7Q9NR12 457 aa14.3□□□□□ -0.12
SRP54-203ENST00000553544 SPTBN5Q9NRC6 3674 aaKnown RBP14.3□□□□□ -0.12
SRP54-203ENST00000553544 COBLO75128 1261 aa14.29□□□□□ -0.12
SRP54-203ENST00000553544 ERCC3P19447 782 aa14.29□□□□□ -0.12
SRP54-203ENST00000553544 TMED8Q6PL24 325 aaPredicted RBP14.29□□□□□ -0.12
SRP54-203ENST00000553544 ABRAQ8N0Z2 381 aa14.29□□□□□ -0.12
SRP54-203ENST00000553544 MAGEB6Q8N7X4 407 aa14.29□□□□□ -0.12
SRP54-203ENST00000553544 MB21D1Q8N884 522 aa14.29□□□□□ -0.12
SRP54-203ENST00000553544 RNPC3Q96LT9 517 aaKnown RBP14.29□□□□□ -0.12
SRP54-203ENST00000553544 POLR3DP05423 398 aaPredicted RBP14.28□□□□□ -0.12
SRP54-203ENST00000553544 GUCY1A2P33402 732 aa14.28□□□□□ -0.12
SRP54-203ENST00000553544 SHMT1P34896 483 aa14.28□□□□□ -0.12
SRP54-203ENST00000553544 PLCD1P51178 756 aa14.28□□□□□ -0.12
SRP54-203ENST00000553544 MAP3K12Q12852 859 aa14.28□□□□□ -0.12
SRP54-203ENST00000553544 PLS1Q14651 629 aa14.28□□□□□ -0.12
SRP54-203ENST00000553544 SEPT2Q15019 361 aa14.28□□□□□ -0.12
SRP54-203ENST00000553544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.28□□□□□ -0.12
SRP54-203ENST00000553544 TANGO6Q9C0B7 1094 aa14.28□□□□□ -0.12
SRP54-203ENST00000553544 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.27□□□□□ -0.13
SRP54-203ENST00000553544 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.27□□□□□ -0.13
SRP54-203ENST00000553544 APBB1O00213 710 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
SRP54-203ENST00000553544 CLTBP09497 229 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 FCER1AP12319 257 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 RAG1P15918 1043 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 TJAP1Q5JTD0 557 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 RNF180Q86T96 592 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 NCAPG2Q86XI2 1143 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 MAML3Q96JK9 1138 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 NRBP1Q9UHY1 535 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 PHF24Q9UPV7 400 aa14.27□□□□□ -0.13
SRP54-203ENST00000553544 A0A1W2PRG0 241 aa14.26□□□□□ -0.13
SRP54-203ENST00000553544 KIAA0355O15063 1070 aa14.26□□□□□ -0.13
SRP54-203ENST00000553544 IFIT2P09913 472 aaKnown RBP14.26□□□□□ -0.13
SRP54-203ENST00000553544 RARBP10826 455 aa14.26□□□□□ -0.13
SRP54-203ENST00000553544 DSG3P32926 999 aa14.26□□□□□ -0.13
SRP54-203ENST00000553544 GRIN2CQ14957 1233 aa14.26□□□□□ -0.13
SRP54-203ENST00000553544 XPNPEP3Q9NQH7 507 aa14.26□□□□□ -0.13
SRP54-203ENST00000553544 TMEM39AQ9NV64 488 aa14.26□□□□□ -0.13
SRP54-203ENST00000553544 TNFRSF10AO00220 468 aa14.25□□□□□ -0.13
SRP54-203ENST00000553544 SLC25A27O95847 323 aa14.25□□□□□ -0.13
SRP54-203ENST00000553544 ITGB8P26012 769 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms