RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 SLITRK4Q8IW52 837 aa5.95□□□□□ -1.46
PCNX4-206ENST00000553513 DUSP15Q9H1R2 295 aaPredicted RBP5.95□□□□□ -1.46
PCNX4-206ENST00000553513 PPP1R1BQ9UD71 204 aaPredicted RBP5.95□□□□□ -1.46
PCNX4-206ENST00000553513 TPP2P29144 1249 aaPredicted RBP5.94□□□□□ -1.46
PCNX4-206ENST00000553513 RNF4P78317 190 aa5.94□□□□□ -1.46
PCNX4-206ENST00000553513 CLCQ05315 142 aa5.94□□□□□ -1.46
PCNX4-206ENST00000553513 ZNF394Q53GI3 561 aa5.94□□□□□ -1.46
PCNX4-206ENST00000553513 CDCP2Q5VXM1 449 aa5.94□□□□□ -1.46
PCNX4-206ENST00000553513 SREK1Q8WXA9 508 aaKnown RBP5.94□□□□□ -1.46
PCNX4-206ENST00000553513 EAF1Q96JC9 268 aaPredicted RBP5.94□□□□□ -1.46
PCNX4-206ENST00000553513 DRC1Q96MC2 740 aa5.94□□□□□ -1.46
PCNX4-206ENST00000553513 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.94□□□□□ -1.46
PCNX4-206ENST00000553513 CTNND2Q9UQB3 1225 aa5.94□□□□□ -1.46
PCNX4-206ENST00000553513 SRFP11831 508 aa5.93□□□□□ -1.46
PCNX4-206ENST00000553513 RAD51AP2Q09MP3 1159 aa5.93□□□□□ -1.46
PCNX4-206ENST00000553513 NLRC3Q7RTR2 1065 aa5.93□□□□□ -1.46
PCNX4-206ENST00000553513 CREG2Q8IUH2 290 aa5.93□□□□□ -1.46
PCNX4-206ENST00000553513 TMEM40Q8WWA1 233 aa5.93□□□□□ -1.46
PCNX4-206ENST00000553513 ALPK1Q96QP1 1244 aa5.93□□□□□ -1.46
PCNX4-206ENST00000553513 CNNM2Q9H8M5 875 aa5.93□□□□□ -1.46
PCNX4-206ENST00000553513 DUSP13Q9UII6 198 aa5.93□□□□□ -1.46
PCNX4-206ENST00000553513 PCDHGB7Q9Y5F8 929 aa5.93□□□□□ -1.46
PCNX4-206ENST00000553513 MEIS3P2A8K0S8 358 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 RBAK-RBAKDNI3L0D1 243 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 LRRN2O75325 713 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 UBOX5O94941 541 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 ESR1P03372 595 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 IMPDH2P12268 514 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 GDNFP39905 211 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 CCNFP41002 786 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 AFMP43652 599 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 GNL2Q13823 731 aaKnown RBP5.92□□□□□ -1.46
PCNX4-206ENST00000553513 GAB4Q2WGN9 574 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 NAALADL2Q58DX5 795 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 TSPYL5Q86VY4 417 aaPredicted RBP5.92□□□□□ -1.46
PCNX4-206ENST00000553513 FAM168AQ92567 244 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 ASCC2Q9H1I8 757 aaPredicted RBP5.92□□□□□ -1.46
PCNX4-206ENST00000553513 CCSER2Q9H7U1 834 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 SLAMF8Q9P0V8 285 aa5.92□□□□□ -1.46
PCNX4-206ENST00000553513 DDX41Q9UJV9 622 aaKnown RBP5.92□□□□□ -1.46
PCNX4-206ENST00000553513 CLEC16AQ2KHT3 1053 aa5.91□□□□□ -1.46
PCNX4-206ENST00000553513 ZSWIM9Q86XI8 627 aa5.91□□□□□ -1.46
PCNX4-206ENST00000553513 ZNF654Q8IZM8 581 aa5.91□□□□□ -1.46
PCNX4-206ENST00000553513 VWCEQ96DN2 955 aa5.91□□□□□ -1.46
PCNX4-206ENST00000553513 CARMIL2Q6F5E8 1435 aa5.91□□□□□ -1.46
PCNX4-206ENST00000553513 WASH4PA8MWX3 477 aa5.9□□□□□ -1.46
PCNX4-206ENST00000553513 CLEC3AO75596 197 aa5.9□□□□□ -1.46
PCNX4-206ENST00000553513 NME1P15531 152 aaKnown RBP5.9□□□□□ -1.46
PCNX4-206ENST00000553513 LTKP29376 864 aa5.9□□□□□ -1.46
PCNX4-206ENST00000553513 POLR2BP30876 1174 aaKnown RBP5.9□□□□□ -1.46
PCNX4-206ENST00000553513 RACK1P63244 317 aaKnown RBP5.9□□□□□ -1.46
PCNX4-206ENST00000553513 EGR3Q06889 387 aa5.9□□□□□ -1.46
PCNX4-206ENST00000553513 KCNMB1Q16558 191 aa5.9□□□□□ -1.46
PCNX4-206ENST00000553513 SYTL4Q96C24 671 aaPredicted RBP5.9□□□□□ -1.46
PCNX4-206ENST00000553513 FERD3LQ96RJ6 166 aa5.9□□□□□ -1.46
PCNX4-206ENST00000553513 TMEM59LQ9UK28 342 aa5.9□□□□□ -1.46
PCNX4-206ENST00000553513 ZNRF3Q9ULT6 936 aa5.9□□□□□ -1.46
PCNX4-206ENST00000553513 LOC105371045A0A1W2PR82 267 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 TNFRSF10CO14798 259 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 RAC2P15153 192 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 HDLBPQ00341 1268 aaKnown RBP5.89□□□□□ -1.47
PCNX4-206ENST00000553513 NBPF12Q5TAG4 269 aaPredicted RBP5.89□□□□□ -1.47
PCNX4-206ENST00000553513 C9orf131Q5VYM1 1079 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 OGFOD2Q6N063 350 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 TTC6Q86TZ1 520 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 METTL16Q86W50 562 aaKnown RBP5.89□□□□□ -1.47
PCNX4-206ENST00000553513 ENOX1Q8TC92 643 aaKnown RBP5.89□□□□□ -1.47
PCNX4-206ENST00000553513 KIRREL1Q96J84 757 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 SPATA32Q96LK8 384 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 ANTXR1Q9H6X2 564 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 C19orf73Q9NVV2 129 aa5.89□□□□□ -1.47
PCNX4-206ENST00000553513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.89□□□□□ -1.47
PCNX4-206ENST00000553513 DNAJC25-GNG10A0A024R161 153 aa5.88□□□□□ -1.47
PCNX4-206ENST00000553513 SHISA3A0PJX4 238 aa5.88□□□□□ -1.47
PCNX4-206ENST00000553513 NMIQ13287 307 aaPredicted RBP5.88□□□□□ -1.47
PCNX4-206ENST00000553513 COL9A2Q14055 689 aaPredicted RBP5.88□□□□□ -1.47
PCNX4-206ENST00000553513 RALGPS1Q5JS13 557 aa5.88□□□□□ -1.47
PCNX4-206ENST00000553513 NT5DC4Q86YG4 428 aa5.88□□□□□ -1.47
PCNX4-206ENST00000553513 POU5F2Q8N7G0 328 aa5.88□□□□□ -1.47
PCNX4-206ENST00000553513 UBXN4Q92575 508 aa5.88□□□□□ -1.47
PCNX4-206ENST00000553513 GOLGA2P5Q9HBQ8 144 aa5.88□□□□□ -1.47
PCNX4-206ENST00000553513 PCDHA11Q9Y5I1 949 aa5.88□□□□□ -1.47
PCNX4-206ENST00000553513 GLI1P08151 1106 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 HMGB1P09429 215 aaKnown RBP5.87□□□□□ -1.47
PCNX4-206ENST00000553513 HK2P52789 917 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 PAK2Q13177 524 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 NBPF9Q3BBW0 867 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 TMEM67Q5HYA8 995 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 FBXW10Q5XX13 1052 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 INTS3Q68E01 1043 aaKnown RBP5.87□□□□□ -1.47
PCNX4-206ENST00000553513 TAB3Q8N5C8 712 aaPredicted RBP5.87□□□□□ -1.47
PCNX4-206ENST00000553513 SYTL5Q8TDW5 730 aaPredicted RBP5.87□□□□□ -1.47
PCNX4-206ENST00000553513 DHX38Q92620 1227 aaKnown RBP5.87□□□□□ -1.47
PCNX4-206ENST00000553513 DHRS1Q96LJ7 313 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 SLC6A18Q96N87 628 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 CAPN10Q9HC96 672 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 FAM53CQ9NYF3 392 aa5.87□□□□□ -1.47
PCNX4-206ENST00000553513 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms