RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 FBXO11Q86XK2 927 aa8.73□□□□□ -1.01
PRKCH-204ENST00000553265 MAP4K3Q8IVH8 894 aa8.73□□□□□ -1.01
PRKCH-204ENST00000553265 TRIM42Q8IWZ5 723 aa8.73□□□□□ -1.01
PRKCH-204ENST00000553265 DTWD1Q8N5C7 304 aa8.73□□□□□ -1.01
PRKCH-204ENST00000553265 GPBAR1Q8TDU6 330 aa8.73□□□□□ -1.01
PRKCH-204ENST00000553265 GPRASP2Q96D09 838 aa8.73□□□□□ -1.01
PRKCH-204ENST00000553265 WDR89Q96FK6 387 aaPredicted RBP8.73□□□□□ -1.01
PRKCH-204ENST00000553265 ACSBG1Q96GR2 724 aa8.73□□□□□ -1.01
PRKCH-204ENST00000553265 UBP1Q9NZI7 540 aa8.73□□□□□ -1.01
PRKCH-204ENST00000553265 SUPT16HQ9Y5B9 1047 aaKnown RBP8.73□□□□□ -1.01
PRKCH-204ENST00000553265 DISP2A7MBM2 1401 aa8.72□□□□□ -1.01
PRKCH-204ENST00000553265 DNAJA1P31689 397 aaKnown RBP8.72□□□□□ -1.01
PRKCH-204ENST00000553265 CRKP46108 304 aa8.72□□□□□ -1.01
PRKCH-204ENST00000553265 CDK8P49336 464 aa8.72□□□□□ -1.01
PRKCH-204ENST00000553265 PODNQ7Z5L7 613 aa8.72□□□□□ -1.01
PRKCH-204ENST00000553265 PRAM1Q96QH2 718 aa8.72□□□□□ -1.01
PRKCH-204ENST00000553265 ADAMTS8Q9UP79 889 aa8.72□□□□□ -1.01
PRKCH-204ENST00000553265 PRR36Q9H6K5 1346 aa8.72□□□□□ -1.01
PRKCH-204ENST00000553265 DHX57Q6P158 1386 aaKnown RBP8.72□□□□□ -1.01
PRKCH-204ENST00000553265 LMO7Q8WWI1 1683 aa8.72□□□□□ -1.01
PRKCH-204ENST00000553265 DLL1O00548 723 aa8.71□□□□□ -1.02
PRKCH-204ENST00000553265 ZNF862O60290 1169 aa8.71□□□□□ -1.02
PRKCH-204ENST00000553265 IGSF3O75054 1194 aa8.71□□□□□ -1.02
PRKCH-204ENST00000553265 TRIM28Q13263 835 aaKnown RBP8.71□□□□□ -1.02
PRKCH-204ENST00000553265 DUOXA2Q1HG44 320 aa8.71□□□□□ -1.02
PRKCH-204ENST00000553265 SHISA2Q6UWI4 295 aa8.71□□□□□ -1.02
PRKCH-204ENST00000553265 KCNQ5Q9NR82 932 aa8.71□□□□□ -1.02
PRKCH-204ENST00000553265 USP35Q9P2H5 1018 aa8.71□□□□□ -1.02
PRKCH-204ENST00000553265 NUP188Q5SRE5 1749 aa8.71□□□□□ -1.02
PRKCH-204ENST00000553265 GREM1O60565 184 aa8.7□□□□□ -1.02
PRKCH-204ENST00000553265 TRIM37O94972 964 aa8.7□□□□□ -1.02
PRKCH-204ENST00000553265 SELPP16109 830 aa8.7□□□□□ -1.02
PRKCH-204ENST00000553265 GJA8P48165 433 aa8.7□□□□□ -1.02
PRKCH-204ENST00000553265 GNL2Q13823 731 aaKnown RBP8.7□□□□□ -1.02
PRKCH-204ENST00000553265 SAFB2Q14151 953 aaKnown RBP eCLIP8.7□□□□□ -1.02
PRKCH-204ENST00000553265 GRIK4Q16099 956 aa8.7□□□□□ -1.02
PRKCH-204ENST00000553265 FAM196AQ6ZSG2 479 aa8.7□□□□□ -1.02
PRKCH-204ENST00000553265 ACAD11Q709F0 780 aa8.7□□□□□ -1.02
PRKCH-204ENST00000553265 PCDHA4Q9UN74 947 aa8.7□□□□□ -1.02
PRKCH-204ENST00000553265 RAB3GAP2Q9H2M9 1393 aa8.7□□□□□ -1.02
PRKCH-204ENST00000553265 KIAA1210Q9ULL0 1709 aa8.69□□□□□ -1.02
PRKCH-204ENST00000553265 FAM83GA6ND36 823 aa8.69□□□□□ -1.02
PRKCH-204ENST00000553265 APOBRQ0VD83 1088 aa8.69□□□□□ -1.02
PRKCH-204ENST00000553265 KRT27Q7Z3Y8 459 aa8.69□□□□□ -1.02
PRKCH-204ENST00000553265 AGGF1Q8N302 714 aaeCLIP8.69□□□□□ -1.02
PRKCH-204ENST00000553265 GATAD2BQ8WXI9 593 aa8.69□□□□□ -1.02
PRKCH-204ENST00000553265 EIF3AQ14152 1382 aaKnown RBP8.69□□□□□ -1.02
PRKCH-204ENST00000553265 FAM221AA4D161 298 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 SPDYE3A6NKU9 549 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 INSM1Q01101 510 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-204ENST00000553265 SEZ6Q53EL9 994 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 PRRT3Q5FWE3 981 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 PMFBP1Q8TBY8 1022 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 SREK1Q8WXA9 508 aaKnown RBP8.68□□□□□ -1.02
PRKCH-204ENST00000553265 PUS7Q96PZ0 661 aaKnown RBP8.68□□□□□ -1.02
PRKCH-204ENST00000553265 WDR18Q9BV38 432 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 RUSC1Q9BVN2 902 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 NT5C1AQ9BXI3 368 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 PPP1R1BQ9UD71 204 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-204ENST00000553265 UTRNP46939 3433 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 WNK3Q9BYP7 1800 aa8.68□□□□□ -1.02
PRKCH-204ENST00000553265 DCDC2CA8MYV0 355 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 PIK3R2O00459 728 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 ELNP15502 786 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 COL8A1P27658 744 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 WIPI1Q5MNZ9 446 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-204ENST00000553265 SPATA31A5Q5VU36 1347 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 LRFN4Q6PJG9 635 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 KIAA1211Q6ZU35 1233 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 SPATA31A7Q8IWB4 1347 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 NKD1Q969G9 470 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 HIRIP3Q9BW71 556 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-204ENST00000553265 TANGO6Q9C0B7 1094 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 KRT82Q9NSB4 513 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 GINM1Q9NU53 330 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 CACNA2D2Q9NY47 1150 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 NOP53Q9NZM5 478 aaKnown RBP8.67□□□□□ -1.02
PRKCH-204ENST00000553265 PARP4Q9UKK3 1724 aaKnown RBP8.67□□□□□ -1.02
PRKCH-204ENST00000553265 EFR3BQ9Y2G0 817 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 CSADQ9Y600 493 aa8.67□□□□□ -1.02
PRKCH-204ENST00000553265 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
PRKCH-204ENST00000553265 RGPD4Q7Z3J3 1758 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 PEAK1Q9H792 1746 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 LRRC37A3O60309 1634 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 GPRASP1Q5JY77 1395 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 CILPO75339 1184 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 BPNT1O95861 308 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 NASPP49321 788 aaPredicted RBP8.66□□□□□ -1.02
PRKCH-204ENST00000553265 ARID5AQ03989 594 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 INPP5AQ14642 412 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 AKAP4Q5JQC9 854 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 BEND7Q8N7W2 519 aaPredicted RBP8.66□□□□□ -1.02
PRKCH-204ENST00000553265 SLC43A3Q8NBI5 491 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 RASGRP4Q8TDF6 673 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 PLPPR2Q96GM1 343 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 BTG4Q9NY30 223 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 PRKAG2Q9UGJ0 569 aa8.66□□□□□ -1.02
PRKCH-204ENST00000553265 POLR3AO14802 1390 aaPredicted RBP8.65□□□□□ -1.02
PRKCH-204ENST00000553265 KIAA0232Q92628 1395 aa8.65□□□□□ -1.02
PRKCH-204ENST00000553265 GRIN3BO60391 1043 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms