RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 ATF3P18847 181 aa13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 KIF5AQ12840 1032 aa13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 TTC38Q5R3I4 469 aa13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 IFIT1BQ5T764 474 aaKnown RBP13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 PSD3Q9NYI0 1048 aa13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 NDUFA10O95299 355 aa13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 CYP7A1P22680 504 aa13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 CCDC51Q96ER9 411 aa13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
PPFIA2-227ENST00000552948 PATL2C9JE40 543 aaKnown RBP13.02□□□□□ -0.32
PPFIA2-227ENST00000552948 GGCXP38435 758 aa13.02□□□□□ -0.32
PPFIA2-227ENST00000552948 CASP7P55210 303 aa13.02□□□□□ -0.32
PPFIA2-227ENST00000552948 KRT83P78385 493 aa13.02□□□□□ -0.32
PPFIA2-227ENST00000552948 RASGRP2Q7LDG7 609 aa13.02□□□□□ -0.32
PPFIA2-227ENST00000552948 SDR42E1Q8WUS8 393 aa13.02□□□□□ -0.32
PPFIA2-227ENST00000552948 GDAQ9Y2T3 454 aa13.02□□□□□ -0.32
PPFIA2-227ENST00000552948 CACNA1FO60840 1977 aa13.02□□□□□ -0.32
PPFIA2-227ENST00000552948 KAT6BQ8WYB5 2073 aa13.02□□□□□ -0.32
PPFIA2-227ENST00000552948 IRS4O14654 1257 aaPredicted RBP13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 AKR1B10O60218 316 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 ERLIN2O94905 339 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 UBA7P41226 1012 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 ATP1A2P50993 1020 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 GNGT1P63211 74 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 SLC20A2Q08357 652 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 C2orf54Q08AI8 447 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 TBC1D8BQ0IIM8 1120 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 LRRC31Q6UY01 552 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 IQCA1Q86XH1 822 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 CCDC42Q96M95 316 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 MMS19Q96T76 1030 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 CPDO75976 1380 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 PPFIA4O75335 1185 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 ATP1A1P05023 1023 aaKnown RBP13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 UQCRFS1P1P0C7P4 283 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 RNASE9P60153 205 aaKnown RBP13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 ERVK-24P63145 666 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 ESR2Q92731 530 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 GSDMAQ96QA5 445 aa13.02□□□□□ -0.33
PPFIA2-227ENST00000552948 DIP2AQ14689 1571 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 RICTORQ6R327 1708 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 TRIM49BA6NDI0 452 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 FOXP2O15409 715 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 ACTN4O43707 911 aaKnown RBP13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 ZPR1O75312 459 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 SLC5A1P13866 664 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 PAFAH1B1P43034 410 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 CCDC178Q5BJE1 867 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 KCTD16Q68DU8 428 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 ANKRD13CQ8N6S4 541 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 HNRNPLLQ8WVV9 542 aaKnown RBP13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 STRBPQ96SI9 672 aaKnown RBP13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 NDUFAB1O14561 156 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 ZNF185O15231 689 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 USO1O60763 962 aaKnown RBP13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 CXCR5P32302 372 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 IFT81Q8WYA0 676 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 SLC7A5Q01650 507 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 CUL4BQ13620 913 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 NTRK3Q16288 839 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 ANKRD18AQ8IVF6 992 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 HAUS4Q9H6D7 363 aa13.01□□□□□ -0.33
PPFIA2-227ENST00000552948 MDM2Q00987 491 aaPredicted RBP13□□□□□ -0.33
PPFIA2-227ENST00000552948 TDRD12Q587J7 1177 aaKnown RBP13□□□□□ -0.33
PPFIA2-227ENST00000552948 EHBP1Q8NDI1 1231 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 TNKSO95271 1327 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 TTC26A0AVF1 554 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 PSMA7O14818 248 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 UBE3CQ15386 1083 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 PACS2Q86VP3 889 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 MSANTD4Q8NCY6 345 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 MMRN2Q9H8L6 949 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 HSF2BPO75031 334 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 INPP5BP32019 993 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 RDXP35241 583 aaKnown RBP13□□□□□ -0.33
PPFIA2-227ENST00000552948 LIFRP42702 1097 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 DNAJC10Q8IXB1 793 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 SPATA5Q8NB90 893 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 RMND1Q9NWS8 449 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 RGPD1P0DJD0 1748 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 NRXN3Q9Y4C0 1643 aa13□□□□□ -0.33
PPFIA2-227ENST00000552948 OTUD6BQ8N6M0 293 aa12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 MED15Q96RN5 788 aa12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 B4DLN1 442 aa12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 ATP2C2O75185 946 aa12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 PARP1P09874 1014 aaKnown RBP12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 USP14P54578 494 aa12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 TRIM14Q14142 442 aa12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 CAPS2Q9BXY5 557 aa12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 NBPF3Q9H094 633 aa12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 BCCIPQ9P287 314 aaKnown RBP eCLIP12.99□□□□□ -0.33
PPFIA2-227ENST00000552948 TACC1O75410 805 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms