RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 PHKBQ93100 1093 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 DCPSQ96C86 337 aaKnown RBP12.69□□□□□ -0.38
LINC00661-206ENST00000552608 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
LINC00661-206ENST00000552608 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC00661-206ENST00000552608 DEFB129Q9H1M3 183 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 SH2D4AQ9H788 454 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 ZDHHC9Q9Y397 364 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 DOCK1Q14185 1865 aa12.68□□□□□ -0.38
LINC00661-206ENST00000552608 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
LINC00661-206ENST00000552608 BAG4O95429 457 aaKnown RBP12.68□□□□□ -0.38
LINC00661-206ENST00000552608 GNL2Q13823 731 aaKnown RBP12.68□□□□□ -0.38
LINC00661-206ENST00000552608 SAFBQ15424 915 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00661-206ENST00000552608 CSPP1Q1MSJ5 1256 aa12.68□□□□□ -0.38
LINC00661-206ENST00000552608 SUPT20HL1Q3ZLR7 823 aa12.68□□□□□ -0.38
LINC00661-206ENST00000552608 MKL1Q969V6 931 aa12.68□□□□□ -0.38
LINC00661-206ENST00000552608 ZNF341Q9BYN7 854 aa12.68□□□□□ -0.38
LINC00661-206ENST00000552608 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
LINC00661-206ENST00000552608 PGAP2Q9UHJ9 254 aa12.68□□□□□ -0.38
LINC00661-206ENST00000552608 WDR90Q96KV7 1748 aa12.68□□□□□ -0.38
LINC00661-206ENST00000552608 CNTNAP5Q8WYK1 1306 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 POLR2AP24928 1970 aaKnown RBP12.67□□□□□ -0.38
LINC00661-206ENST00000552608 PALM3A6NDB9 673 aaPredicted RBP12.67□□□□□ -0.38
LINC00661-206ENST00000552608 GH2P01242 217 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 ASNSP08243 561 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 EEF2P13639 858 aaKnown RBP12.67□□□□□ -0.38
LINC00661-206ENST00000552608 MCM4P33991 863 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 CAP2P40123 477 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 SEPT2Q15019 361 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 GPATCH4Q5T3I0 446 aaKnown RBP12.67□□□□□ -0.38
LINC00661-206ENST00000552608 CDC37L1Q7L3B6 337 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 LRRC47Q8N1G4 583 aaKnown RBP12.67□□□□□ -0.38
LINC00661-206ENST00000552608 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 DCAF4Q8WV16 495 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 TEPSINQ96N21 525 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 MAD2L2Q9UI95 211 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 ZBTB21Q9ULJ3 1066 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
LINC00661-206ENST00000552608 PPFIA3O75145 1194 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 PLEKHA8P1O95397 391 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 EPHX2P34913 555 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 FOSBP53539 338 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 MIGA2Q7L4E1 593 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 USP48Q86UV5 1035 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 SULF1Q8IWU6 871 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 FAM177A1Q8N128 213 aaPredicted RBP12.66□□□□□ -0.38
LINC00661-206ENST00000552608 CCDC82Q8N4S0 544 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 ZC3H15Q8WU90 426 aaKnown RBP12.66□□□□□ -0.38
LINC00661-206ENST00000552608 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 BRMS1Q9HCU9 246 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 GOPCQ9HD26 462 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 TCHHQ07283 1943 aa12.66□□□□□ -0.38
LINC00661-206ENST00000552608 ASTN2O75129 1339 aaPredicted RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 KLRF2D3W0D1 207 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 CTNND1O60716 968 aaKnown RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 DTNBO60941 627 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 SNHG28P0DPA3 235 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 PDHBP11177 359 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 HIRAP54198 1017 aaPredicted RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 KRT85P78386 507 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 CCDC96Q2M329 555 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 SLFN13Q68D06 897 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 KRT40Q6A162 431 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 ATL3Q6DD88 541 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 BRAPQ7Z569 592 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 FERMT3Q86UX7 667 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 SRBD1Q8N5C6 995 aaKnown RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 GMCL1P1Q8NEA9 526 aa12.65□□□□□ -0.38
LINC00661-206ENST00000552608 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 ZNF396Q96N95 335 aaPredicted RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 V9GY48 417 aaPredicted RBP12.65□□□□□ -0.38
LINC00661-206ENST00000552608 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 RAD21O60216 631 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 SLURP2P0DP57 97 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 SCG2P13521 617 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
LINC00661-206ENST00000552608 GUCY1A2P33402 732 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 ZNF543Q08ER8 600 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 FUT2Q10981 343 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 RESTQ13127 1097 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 PFKFB3Q16875 520 aaPredicted RBP12.64□□□□□ -0.39
LINC00661-206ENST00000552608 SKOR2Q2VWA4 1001 aaPredicted RBP12.64□□□□□ -0.39
LINC00661-206ENST00000552608 NBPF12Q5TAG4 269 aaPredicted RBP12.64□□□□□ -0.39
LINC00661-206ENST00000552608 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 STAG2Q8N3U4 1231 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 CCDC148Q8NFR7 591 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 CCDC12Q8WUD4 166 aaPredicted RBP12.64□□□□□ -0.39
LINC00661-206ENST00000552608 AS3MTQ9HBK9 375 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
LINC00661-206ENST00000552608 ISY1Q9ULR0 285 aaKnown RBP12.64□□□□□ -0.39
LINC00661-206ENST00000552608 MMP1P03956 469 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
LINC00661-206ENST00000552608 NF2P35240 595 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms