RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 PSMA7O14818 248 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 KSR1Q8IVT5 923 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 GRIN1Q05586 938 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 KANSL2Q9H9L4 492 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 LRWD1Q9UFC0 647 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 PDIA4P13667 645 aaKnown RBP12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 UBE4AQ14139 1066 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 STK32BQ9NY57 414 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 VWDEQ8N2E2 1590 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 TSG101Q99816 390 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 TDRD3Q9H7E2 651 aaKnown RBP12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 DLC1Q96QB1 1528 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 PPEF1O14829 653 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 ZSCAN12O43309 604 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 SCG2P13521 617 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 CALML3P27482 149 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 CDR1P51861 262 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 CSGALNACT2Q8N6G5 542 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 ENAHQ8N8S7 591 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 SPAG5Q96R06 1193 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 SSH2Q76I76 1423 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 TBCAO75347 108 aaKnown RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 TAL1P17542 331 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 ZNF397Q8NF99 534 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 HPS3Q969F9 1004 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 PPP1R9BQ96SB3 815 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 EPB41L4AQ9HCS5 686 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 RABL6Q3YEC7 729 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 TAX1BP1Q86VP1 789 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 TTC16Q8NEE8 873 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 BICD1Q96G01 975 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 BCCIPQ9P287 314 aaKnown RBP eCLIP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 MYOM1P52179 1685 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 RPAP1Q9BWH6 1393 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 ELF2Q15723 593 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 BLIDQ8IZY5 108 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 TEKT1Q969V4 418 aa12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 BAG1Q99933 345 aaPredicted RBP12.15□□□□□ -0.46
TGFBR1-209ENST00000552516 GNAQP50148 359 aa12.15□□□□□ -0.47
TGFBR1-209ENST00000552516 GPSM2P81274 684 aa12.15□□□□□ -0.47
TGFBR1-209ENST00000552516 TBC1D8BQ0IIM8 1120 aa12.15□□□□□ -0.47
TGFBR1-209ENST00000552516 REXO1Q8N1G1 1221 aaKnown RBP12.15□□□□□ -0.47
TGFBR1-209ENST00000552516 TMEM260Q9NX78 707 aa12.15□□□□□ -0.47
TGFBR1-209ENST00000552516 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.47
TGFBR1-209ENST00000552516 MED23Q9ULK4 1368 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 GNA11P29992 359 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 GSDMDP57764 484 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 TMCO3Q6UWJ1 677 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 FAM107BQ9H098 131 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 SYNRGQ9UMZ2 1314 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 ANTXR2P58335 489 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 GPS2Q13227 327 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 ADGRA1Q86SQ6 560 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 TPH2Q8IWU9 490 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 CTNNBL1Q8WYA6 563 aaPredicted RBP12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 CARD6Q9BX69 1037 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 CCDC113Q9H0I3 377 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 CUTAO60888 179 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 CAMTA2O94983 1202 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 AOC3Q16853 763 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 NELFBQ8WX92 580 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 WDHD1O75717 1129 aaPredicted RBP12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 CTDNEP1O95476 244 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 NLRP12P59046 1061 aa12.14□□□□□ -0.47
TGFBR1-209ENST00000552516 PSDA5PKW4 1024 aaPredicted RBP12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 CABP7Q86V35 215 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 SFI1A8K8P3 1242 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 NONOQ15233 471 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■■■□□ 16.4
TGFBR1-209ENST00000552516 CALCRLQ16602 461 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 CSRNP1Q96S65 589 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 TCHPQ9BT92 498 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 ERVV-1B6SEH8 477 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 DLGAP5Q15398 846 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 MB21D2Q8IYB1 491 aaPredicted RBP12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 ZNF526Q8TF50 670 aaPredicted RBP12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 NOC4LQ9BVI4 516 aaKnown RBP12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 LY9Q9HBG7 655 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 BACH1O14867 736 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 KRT9P35527 623 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 PLCD1P51178 756 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 CTR9Q6PD62 1173 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 DCP1AQ9NPI6 582 aaPredicted RBP12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 BSDC1Q9NW68 430 aaPredicted RBP12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 XDHP47989 1333 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 RPS6KA4O75676 772 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 AMPD3Q01432 767 aa12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 HLTFQ14527 1009 aaKnown RBP eCLIP12.13□□□□□ -0.47
TGFBR1-209ENST00000552516 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms